Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4974g00001 ATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTGCGACATGATCAGGGAGCTTCTTAATATACAGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTGATGATAATGAGAACTCGGGGGAATCTGAACAAGATGTCCCAATGGCCTCAATGCTGAACATGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGTTATCAAGGGCTAACAACCCTATCGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCCTGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACTAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAACGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACTGTTGTGTCTCTTCCTATTGGGGGCAATGATCTCAAAAGGATTCGCTTCTTCCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTGCGACATGATCAGGGAGCTTCTTAACATACAGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTGATGATAATGAGAACTCCGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACATGGATTCGACTCGGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGTTGAATGGGTTGAGCAGGATGATCCTGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACTAGGCAAATTTGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAACCAAGGATTGGTGA 1119 0.4799 MFDKSRAQRWWAENCDMIRELLNIQTLNQRVFITPARSDDNENSGESEQDVPMASMLNMDSTPGNFHAPAGNMGYFHGGLSRANNPIDNDMDAEWVEQDDPGVSITVKRSANGTRQIRRIKFSREIFDADAAKDWWLRNRIKDLALKLSGKKIKGGTSESINASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPIGGNDLKRIRFFRDMFDKSRAQRWWAENCDMIRELLNIQTLNQRVFITPARSDDNENSGESEQDIPMASMLNMDSTRGNFHAPAGNMGYFHGGISRANNPTDNDMDVEWVEQDDPGVSITVKRSANGTRQICRIKFSREIFDADATKDW 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4974g00001 372 ProSiteProfiles BRX domain profile. 93 148 IPR013591 -
Gabi4974g00001 372 MobiDBLite consensus disorder prediction 155 189 - -
Gabi4974g00001 372 Pfam Transcription factor regulating root and shoot growth via Pin3 205 256 IPR013591 -
Gabi4974g00001 372 Pfam Transcription factor regulating root and shoot growth via Pin3 93 141 IPR013591 -
Gabi4974g00001 372 Pfam Transcription factor regulating root and shoot growth via Pin3 331 372 IPR013591 -
Gabi4974g00001 372 ProSiteProfiles BRX domain profile. 330 372 IPR013591 -
Gabi4974g00001 372 ProSiteProfiles BRX domain profile. 205 260 IPR013591 -
Gabi4974g00001 372 MobiDBLite consensus disorder prediction 154 193 - -
Gabi4974g00001 372 PANTHER PROTEIN BREVIS RADIX-LIKE 1 161 372 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4974g00001 Gabi-Chr4974 1589 11285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4974g00001 137 372 Major Intrinsic Protein MIP AT1G31880 37.037 6.19e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4974g00001 - - jre:109014251 180.644