Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4965g00005 ATGGCTTCCCCTAATTCATGTCTTCAATCTGCTCCTATTGATTATGAAACTAAACACATCTCAAAATCAGTACCCCAGCAAAGTGTCCTAGACATTGAGGTCACCACACTTGAAATGGAAGCTATTAGAGCTCCAAAAAAGAATGGAGGAGAAGCTAAGACAGAAGAGGTGGGTATCTTTCTGACATGGAAGGATCTATGGGTGACTGCTTCAAAGGGAAAGAATGGAAGCAAAACAATTCTTGAGGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCATAATGGGTCCTTCTGGTTGTGGCAAGTCTACACTACTTGATACTTTAGCAGGGAGATTAGGTTCAAACATAAGGCAAACGGGGGAGATTCTGATCAATGGTCGCAAACAAGCACTTGCTTATGGAACCTCGGCATATGTCACACAAGATGATACATTATTGACAACCTTAACTGTTAAAGAAGCGGTGCACTATTCAGCTCAACTCCAATTACCTGACTCCATGTCCAAGGCAGAGAAAAAAGAGATAGCAGACTTTACAATAAGAGAAATGGGTTTGCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTTCTAAAGGCATTAGTGGGGGTCAAAAGAGGAGAGTGGGCATATGCATCGAGATCCTAACACGTCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAGAAGAATTGCTACCCTGGCTCAAAAAGATGGCATTCAGAGGACTGTTATTGCATCAATCCATCAGCCTAGTAGTGAAGTTTTTCAACTCTTCCATAACCTTTGTCTTCTGTCTTCTGGTAGAACAGTTTACTTTGGACCTGCTTCTGCTGCAACTGAGTTTTTCACTTCAAATGGTTTTCCTTGTCCTGCTCTCCAAAATCCATCTGATCATTTACTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAAGTGGGTTTAGCAGGGACTGGAACAATACCCACAGAAGAAGCAATCCGTATTCTTGTGACATCATATAAATCATCTGAAAGGAACCAAGAAGTTCAAAACGAAGTAGCAGTACTATCTGAAAAGGAAACCAGTTCAATTGACAAGAAGAGAGGACACGCAGGCTTCCTTAATCAGTGCTTAGTTCTTATAAAGAGATCGTCCGTGAACATGTTTCGTGATCTAGGCTATTACTGGTTACGCCTAGCCATATATGTAGCATTGGCTTTAAGTTTAGGCACTGTTTTCTATAATTTGGATACCAGTAATGGCTCAATTAAGGACAGAGGTTCACTTCTTGCATTTGTGTCTGCATTCCTAACTTTTATGACCATCGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTCAACGAGAAAGACAAAATGGGCATTATGGTGTCACTGCGTTTGTAATTGGGAACACCTTTTCCTCTGTCCCATACTTGTTGTTGGTTACCCTGATTCCTGGAGTTATAACTTATTTCCTTGCTGGTCTTCAGAAAGGATACGAGCACATTTTGTACTTCTTGTGTGTTATATTTTCTAGTTTGATGTTAGTGGAGAGTCTTATGATGATAGTTGCTACTGTTGTTCCCAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAATCATGCTTTTAATTAGCGGGTTCTTTAGATTGCCACATGATCTTCCAAGGCCATTTTGGAGATACCCATCACACTATGTTGCCTTCCATACATATGCCTTTCAAGGACTGCTCAAGAATGAGTTTGAAGGACTAAGGTTTGCTACAAATCAAGGCTCACACAATTACATTAGTGGTGAAGAGATTTTAAGAAATACATGGCAAGTTGACATGAGTATATCAAAATGGGTTGATCTTGCAATCCTTGTGGGGATGATTGTTCTGTATCGTGTTCTGTTTTTCATTATCATCAAGACTATTGAGAAGGTGAAGCCTGTGGTTGTATCACTATCATGCATGTCAGGGTCTCCCAAGGGAACAATACAGATCGTGGAGAACCCCAATGCCACTCCTTTACAAGGAGAGGTTTTATAA 2079 0.4089 MASPNSCLQSAPIDYETKHISKSVPQQSVLDIEVTTLEMEAIRAPKKNGGEAKTEEVGIFLTWKDLWVTASKGKNGSKTILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNIRQTGEILINGRKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKEIADFTIREMGLQDAINTRIGGWGSKGISGGQKRRVGICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIATLAQKDGIQRTVIASIHQPSSEVFQLFHNLCLLSSGRTVYFGPASAATEFFTSNGFPCPALQNPSDHLLKTINKDFDQDIEVGLAGTGTIPTEEAIRILVTSYKSSERNQEVQNEVAVLSEKETSSIDKKRGHAGFLNQCLVLIKRSSVNMFRDLGYYWLRLAIYVALALSLGTVFYNLDTSNGSIKDRGSLLAFVSAFLTFMTIGGFPSFVEDMKVFQRERQNGHYGVTAFVIGNTFSSVPYLLLVTLIPGVITYFLAGLQKGYEHILYFLCVIFSSLMLVESLMMIVATVVPNFLMGIITGAGIQGIMLLISGFFRLPHDLPRPFWRYPSHYVAFHTYAFQGLLKNEFEGLRFATNQGSHNYISGEEILRNTWQVDMSISKWVDLAILVGMIVLYRVLFFIIIKTIEKVKPVVVSLSCMSGSPKGTIQIVENPNATPLQGEVL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4965g00005 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 298 IPR027417 -
Gabi4965g00005 692 ProSitePatterns ABC transporters family signature. 204 218 IPR017871 GO:0005524|GO:0016887
Gabi4965g00005 692 Gene3D - 61 300 IPR027417 -
Gabi4965g00005 692 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 307 IPR003439 GO:0005524
Gabi4965g00005 692 FunFam ABC transporter G family member 11 59 349 - -
Gabi4965g00005 692 Pfam ABC-2 type transporter 264 318 IPR043926 GO:0140359
Gabi4965g00005 692 Pfam ABC transporter 83 232 IPR003439 GO:0005524
Gabi4965g00005 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 52 664 - -
Gabi4965g00005 692 Pfam ABC-2 type transporter 386 597 IPR013525 GO:0016020|GO:0140359
Gabi4965g00005 692 SMART AAA_5 90 279 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4965g00005 Gabi-Chr4965 110456 118353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4965g00005 80 292 Calmodulin-binding Proteins AT2G36910 27.982 1.21e-09 60.1