Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4965g00004 ATGAACCCTCTTGTGCAACCTCATGCTAGTGATAGTGAAGCAAATAATAGCTCTAAAATTCTGCCAACCATTGAATTTGAGACCACATTTGGGGTGGAAGACATCAAATCAATAGAAACTGGTAAAGTTGGTCAGGCAGATCAAGAGGAGGGTGCTTTCTTAACATGGGAGGACTTGTGGGTGACTGTTTCAAATGGAAAGAATGGAAGGAAACCAATACTTCAGGGTCTAAATGGCTATGCAAAACCTGGAAAACTCTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAGTCCACACTTCTTGATGCTTTAGCAGGAAGATTAGGTTCAAAGAGAAATCAAACAGGGAAGATCCTAATCAATGGCCGCAAACAAGCACTAGCATATGGAACATCTGCATATGTAACAGAAGATGATACTATTTTGACAACTCTAACAGTTGGAGAAGCTATAAACTACTCAGCTCACCTCCAATTGCCAGATTCCATGTCAAAGTCAGAGAAAAAGGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACCAGAATTGGAGGGCGGGGATCTAAAGGCCTTAGTGGTGGGCAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCTAGGCTTCTCTTCCTTGATGAACCCACTAGTGGACTTGATAGTGCAGCTTCTTATTATGTTATGAGGAGAATATCCAGCTTAAACAAAAAGGATGGAATGCCAATGACTATTATTGCATCAATCCATCAGCCAAGTAATGAAATTTTTCAAATTTTCCACAACCTTTGTCTTCTGTCTTCTGGGAAAACAGTTTACTTTGGACCTGTCTCCTCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCCCTGCCCAAGTCTCCAGAGTCCTTCTGATCACTTCTTAAAAACCATCAACAAGGATTTTGAACTGGACCCTGAGAAAGAATTGGCCGGAGGTCTAAGCACAGAAGAAGCAATTCATATTCTTGTTAAATCATATGATTCATCTGAATTCAGTCACCAAGTTCTGAAAGAAGTTGCTCAAATAAGAAAAAGGGACTCGTACACAATGGAGAAGAAACATCATGCTGACTTTGTTACACAGTGCCTCATTCTTACAAGAAGATCTTTTGTGAATATGTATCGTGAAGTAGGCTATTACTGGTTACGCCTACTTATCTATGGTGCCTTGGCTTTAAGTCTCGGTACCATGTTCTTTGACATTGGTTCAAGCAGTGAATCAATTCAGGCTAGAGGTTCACTGCTTGTGTTTGTTGTTACATTCCTGACCTTCATAAATGTTGCTGGGTTCCCTTCTTTTGTGGAGGATATGAAGGTGTTTGAACGAGAAAGACTAAATGGACATTATGGTGTCACTGCATTTACCATTGGCAATACGTTATCTGCTATTCCATTCTTGCTGTTGATGTCATTGATCCCAGGAGCATTGGTTTACTACCTAGTCGGACTTCAAAAAGGACATGAACATTTTTTGTACTTTATATCAGTGCTTTTTATTTCTCTCTTGTTGGTTGAGGGTCTCATGATGATTATTGCAAGTATGATTCCCAATTTCCTGATGGGCATTATCTTTGGTTCTGGAATCTTGGGAGTAATGATGTTAGATGGTGGGTTCTATAGGCTGCCAAGTGATATTCCAAAGCCCTTTTGGAAATACCCTTTGCGCTACATTTCCTTCCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAGTTTCAAGGTCTAACATTCACTGGCAATCAAATTGGAGGACCTATGACAATTAGTGGTGAAGATATACTAAGACATGTATGGCAAGTGGAAATGAATTACTCAAAGTGGGTGGATGTTGCTATGTTGGTAGGAATGGCATTAATATATCGAATTCTGTTTTTGGTTATCATCAAGAGCATTGAGAAGGTGAAGCCATTGTTGCAGCAATTAATTGTCCCCAAGCAAACTGTAGGTTCACTACAGCGACAAGGAGCAATTAGATTGATTAGCTTGTAA 2034 0.3992 MNPLVQPHASDSEANNSSKILPTIEFETTFGVEDIKSIETGKVGQADQEEGAFLTWEDLWVTVSNGKNGRKPILQGLNGYAKPGKLLAIMGPSGCGKSTLLDALAGRLGSKRNQTGKILINGRKQALAYGTSAYVTEDDTILTTLTVGEAINYSAHLQLPDSMSKSEKKERADFTIREMGLQDAINTRIGGRGSKGLSGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMRRISSLNKKDGMPMTIIASIHQPSNEIFQIFHNLCLLSSGKTVYFGPVSSANKFFSSNGFPCPSLQSPSDHFLKTINKDFELDPEKELAGGLSTEEAIHILVKSYDSSEFSHQVLKEVAQIRKRDSYTMEKKHHADFVTQCLILTRRSFVNMYREVGYYWLRLLIYGALALSLGTMFFDIGSSSESIQARGSLLVFVVTFLTFINVAGFPSFVEDMKVFERERLNGHYGVTAFTIGNTLSAIPFLLLMSLIPGALVYYLVGLQKGHEHFLYFISVLFISLLLVEGLMMIIASMIPNFLMGIIFGSGILGVMMLDGGFYRLPSDIPKPFWKYPLRYISFHKYAYQGLFKNEFQGLTFTGNQIGGPMTISGEDILRHVWQVEMNYSKWVDVAMLVGMALIYRILFLVIIKSIEKVKPLLQQLIVPKQTVGSLQRQGAIRLISL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4965g00004 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 290 IPR027417 -
Gabi4965g00004 677 Pfam ABC transporter 75 225 IPR003439 GO:0005524
Gabi4965g00004 677 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524|GO:0016887
Gabi4965g00004 677 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 300 IPR003439 GO:0005524
Gabi4965g00004 677 Pfam ABC-2 type transporter 375 587 IPR013525 GO:0016020|GO:0140359
Gabi4965g00004 677 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 658 - -
Gabi4965g00004 677 Pfam ABC-2 type transporter 257 354 IPR043926 GO:0140359
Gabi4965g00004 677 Gene3D - 54 316 IPR027417 -
Gabi4965g00004 677 SMART AAA_5 83 272 IPR003593 GO:0016887
Gabi4965g00004 677 FunFam ABC transporter G family member 11 52 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4965g00004 Gabi-Chr4965 68603 78021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4965g00004 73 235 Calmodulin-binding Proteins AT2G36910 31.138 1.33e-10 63.2