Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4954g00007 ATGTCGTCGCCGGGTTTCACTGGCGGTGGTGGAGCGTCAGAGTTTTTCGCCGGAGCAGGTGGTCTCTCCGGCAGATCCATTGCGGCGGCGGCAACCATGAACAACCCCATCACCAACCCATCCGCCACCAACAACAACCACCTTAACCCTTCACACCACACTTTCTACCGAACCCAGCAACAACTCCCCGCAATGTTTCTAGATCCTTCTTCTCAGATCGCTCAGCGCCAAGCATCATCCCTCATCGGTAAACGCACCCTCGCTGAATTCCAAACCCACCAGAACCACAACCACAACCACAACCACAACCTTAACAGTAACAATAACCTTAATCTTCACCAGAACCAGATTCTTTCAAACCTTCTACTTCGTTCTGTGAAACCAAGAACAACTTTTCAGCATGGTTCTCCCTTGTCTCCTATGTCACCCATGGATTTTTCCATCTCTGAATTGCAAAACCCTTCTTCGGGTTTCCAAACGCAGCGTTTTGGTGTGCCCCTTCTTCACCAGCTTCGTCCTCAACCCATTAACCTACCCAACAATACTAACAACAACGGGACCTTACCCATGACAAACACGATCCTCCAAAACCCGAACTTTCCTTACCGGAGCTCCAATTTGGGTTTGGTGCAGAACCGGGTTCAGAACTCTGAACCGGAGAAGAAGATCATGGAGAACCGGTTACAGGAGTTAGAGAAACAGCTTCTTGAAGATAACGACGAAGAAGGAGAAGCTGATGCAGCCTCTGTGATCACAACAAGCGAGTGGTCAGAGACATATCAGAACCTGATCAGCCCGGGTCCGACCCAGAAACCCGCTTCGTCATCACCCACTTCGTCGACGACGTCGTCGACATCTTCTTCTACCTCCGTGGCTTCCCCTGCTTCTGGGTGCTCCAAGCAGAGTTTAATGGAGGCAGCATCTTCAATTTCCGAAGGGAAACACGATGCCGCGTCGGAGATTCTTGCCCGTTTGGTTCAGGCTCCGAACCCGAGCCCAAACCCGAGCCCGAATGCGAATTCGGATCAGCGTTTAACTGATTGCATGGTTTCTGCTCTGAAATCAAGAATGAACCCGGTTGAAAACCCACCACCTGTTGGGGAGCTCTATAGTAGGGAACACGCTGAGTCGACTCAGTTGCTGCTTGAAAACTCGGTGTGCTTCAAGGTTGGTTTCATGGCTGCGAATCTCGCGATTCTCGAAGCTGCATTTGAGGAGAAAACAGAGAACGGGAACGGTTTCTGTGTTGTGGATTTTGATATTGGACAGGGGAAGCAGTACGTGAACCTCCTGAGTCTTCTTTCGGCGCGTGCGCAGGCGGCGCCGGCGGTGAAGATTGTTGCTGTGGCGGAGAACGGCGGCGAGGAGAAGGTGAGGGCTGTGGGGGAGATGCTGAGTCGACAAGCGGAGAGGTTAAGGATCAGGTTCGAGTTCAGGATGGTTTCGGTGACTCAGAAACTCGCTGAGTTGACTCGCGAGTCGCTGGGTTGTGACCCGGACGAGCCACTAATGGTGAACTTCGCGTTTAAGTTGAATCGGATTCCCGACGAGAGCGTTTCCACGGAGAACCCGCGTGACGAGCTTTTGAGGCGCGTGAAGAAGCTCGCGCCGCGCGTGGTGATATTGCTGGAGCAAGAGATGAACGCCAACACGGCGCCGTTTTTGGCTCGCGTGGCCGAGTCGTGGTCCTACTACAGCTCTTTATTTGACTCAATTGAGTCTGTGATGGGGAGGGACAACTCGGACCGAGTCAGAGTGGAGGAGGGGCTGAGTCGGAAGCTATGCAACTCGGTGGCTTGTGAAGGGAGGGATCGCTTGGAACGATGCGAAGTTTTCGGGAAATGGCGCGCGCGTATGAGCATGGCTGGGTTCCAGTTGAAACCACTGAGTCAAAGCGTGGCCGAGTCAATAAAATCGCTGGGTAACAACAACCGAGTCAACCCGGGACTCACTGTGAAAGAAGAGAACGGTGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACCGTCGCTTCTGCTTGGCGTTAA 2028 0.5281 MSSPGFTGGGGASEFFAGAGGLSGRSIAAAATMNNPITNPSATNNNHLNPSHHTFYRTQQQLPAMFLDPSSQIAQRQASSLIGKRTLAEFQTHQNHNHNHNHNLNSNNNLNLHQNQILSNLLLRSVKPRTTFQHGSPLSPMSPMDFSISELQNPSSGFQTQRFGVPLLHQLRPQPINLPNNTNNNGTLPMTNTILQNPNFPYRSSNLGLVQNRVQNSEPEKKIMENRLQELEKQLLEDNDEEGEADAASVITTSEWSETYQNLISPGPTQKPASSSPTSSTTSSTSSSTSVASPASGCSKQSLMEAASSISEGKHDAASEILARLVQAPNPSPNPSPNANSDQRLTDCMVSALKSRMNPVENPPPVGELYSREHAESTQLLLENSVCFKVGFMAANLAILEAAFEEKTENGNGFCVVDFDIGQGKQYVNLLSLLSARAQAAPAVKIVAVAENGGEEKVRAVGEMLSRQAERLRIRFEFRMVSVTQKLAELTRESLGCDPDEPLMVNFAFKLNRIPDESVSTENPRDELLRRVKKLAPRVVILLEQEMNANTAPFLARVAESWSYYSSLFDSIESVMGRDNSDRVRVEEGLSRKLCNSVACEGRDRLERCEVFGKWRARMSMAGFQLKPLSQSVAESIKSLGNNNRVNPGLTVKEENGGICFGWMGRTLTVASAWR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4954g00007 675 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 260 645 IPR005202 -
Gabi4954g00007 675 ProSiteProfiles GRAS family profile. 290 675 IPR005202 -
Gabi4954g00007 675 Coils Coil 214 241 - -
Gabi4954g00007 675 Pfam GRAS domain family 300 675 IPR005202 -
Gabi4954g00007 675 MobiDBLite consensus disorder prediction 262 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4954g00007 Gabi-Chr4954 93905 96241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4954g00007 53 675 GRAS Transcription Factor Family AT5G52510 50.078 3.04e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi4954g00007 GRAS 1.4e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4954g00007 - - gmx:100788551 799.66