Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4953g00011 ATGGGTGTTGAAAATGGAGAGTTCACAGTGAGTGTGACCAAAGAAGAGGTGGTGGCAGCAGTGCTTCCAATCCAAGAACATTGGTTACCACTTTCTAACCTTGACCTTCTTCTACCTCCTGTGGATGTGGGGGTCTTCTTCTGCTACAAGAACCCAATGTTCATCTTTGGATCCATGGTGGGGTCTCTGAAGAAGGGCTTAGCTCAGGCTCTGGTGTCCTACTATGCCTTTGCAGGTGAAGTTGTACCCAACACTGTGGGTGAACCTGAGCTTCTTTGTAATAATCGTGGGGTCGATTTTGTTGAAGCTGTAGCAGATGTTGAGCTAAAGTGCCTTAACTTCTACAACCCAGATGACACCTTTGAAGATAAGCTTGTTCCAAAGAAGAAGCATGGCGTGCTTGCTGTCCAGGCAACTTCACTCAAGTGTGGAGGGATAGTAGTGGCATGCACATTTGATCATCGTATAGCAGATGCCTATTCAGCAAACATGTTCCTCGTATCATGGGCCCATATGGCCCAGCCCACCAAGCCCATAACCATCTCCACCACGGCCACGACCACCTTCCACCACCCATGTTTCCGTCGCTCCCTCCTCAGCCCTCGCCGCCCAGCTTCCATCCACCCTTCCCTCCACCACATGTATGTACCCATCTCCAAGCTCACTCCTCCTCCGGCCACCACCACCGCCACCCCTCTCATCAGCCGCATTTACTACGTCACTGCGGAGCAACTTCGTCGCATGCAGTCACTAGCCGATGAAACCAGCAACGATAGCGCTAAATACACAAAGCTCGAGTCTTTCTCCGCGTTCTTGTGGAAGATGGTTGCTCGTGCAGCTTCAAGAGACATCAATGGCAAAAGGGTCATTGCTAAAATGGGCATCGTGGTTGATGGAAGGAAGAGGCTTGGTAATAGTGGTGGTGGCGATACAGGGAGAGAAGCAATGATGGATTGTTATTTTGGGAATGTTCTTTCCATACCCTTTGGTGGGAAACCGGTGGAGGAGCTGGTGGAGAAGCCGTTGGGGTGGGTGGCGGATGAGGTTCACGAGTTCTTAGCGGTGGCGGCCACGGAGGAGCACTTCTTGGGGCTCATTGATTGGGTGGAAACGCACCGGCCGGTCCCCGGGTTGGCAAGGATTTATTGCGGTGGCGCCGACGAGGGACCAGCTTTTGTGGTGTCTTCCGGGCAAAGGTTCCCGGAGGAGAAGGTGAACTTTGGGTGGGGGAAGGTTGTGTTTGCATCATACCATTTTCCTTGGGGCGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTGAGAAGGGACAATTGGAGATCATTGAATCTGAGGCTGCTCATGTCTTTAGGCCGTTAACTTGGGATTATCTTAATCAATGA 1419 0.5159 MGVENGEFTVSVTKEEVVAAVLPIQEHWLPLSNLDLLLPPVDVGVFFCYKNPMFIFGSMVGSLKKGLAQALVSYYAFAGEVVPNTVGEPELLCNNRGVDFVEAVADVELKCLNFYNPDDTFEDKLVPKKKHGVLAVQATSLKCGGIVVACTFDHRIADAYSANMFLVSWAHMAQPTKPITISTTATTTFHHPCFRRSLLSPRRPASIHPSLHHMYVPISKLTPPPATTTATPLISRIYYVTAEQLRRMQSLADETSNDSAKYTKLESFSAFLWKMVARAASRDINGKRVIAKMGIVVDGRKRLGNSGGGDTGREAMMDCYFGNVLSIPFGGKPVEELVEKPLGWVADEVHEFLAVAATEEHFLGLIDWVETHRPVPGLARIYCGGADEGPAFVVSSGQRFPEEKVNFGWGKVVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLEKGQLEIIESEAAHVFRPLTWDYLNQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4953g00011 472 Pfam Transferase family 9 460 - -
Gabi4953g00011 472 Gene3D - 7 217 IPR023213 -
Gabi4953g00011 472 Gene3D - 218 457 IPR023213 -
Gabi4953g00011 472 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4953g00011 Gabi-Chr4953 121597 126292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4953g00011 19 455 Monolignol Biosynthesis Gene Families AT5G48930 27.332 1.74e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4953g00011 - - gmx:100785067 724.931