Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4953g00010 ATGGGTGTTGAAAATGGAGAGTTCACAGTGAGTGTGACCAAAGAAGAGGTGGTGGCAGCAGTGCTTCCAATCCAAGAACATTGGTTACCACTTTCTAACCTTGACCTTCTTCTACCTCCTGTGGATGTGGGGGTCTTCTTCTGCTACAAGAACCCAATGTTCATGTCCACTACCTTAGGGAACGGTAGTACTGACACCAACAACATGATGAGCTTTGGATCCATGGTGGGGTCTCTGAAGAAGGGCTTAGCTCAGGCTCTGGTGTCCTACTATGCCTTTGCAGGTGAAGTTGTACCCAACACTGTGGGTGAACCTGAGCTTCTTTGTAATAATCGTGGGGTCGATTTTGTTGAAGCTGTAGCAGATGTTGAGCTAAAGTGCCTTAACTTCTACAACCCAGATGACACCTTTGAAGATAAGCTTGTTCCAAAGAAGAAGCATGGCGTGCTTGCTGTCCAGGCAACTTCACTCAAGTGTGGAGGGATAGTAGTGGCATGCACATTTGATCATCGTATAGCAGATGCCTATTCAGCAAACATGTTCCTCGTATCATGGGCCCATATGGCCCAGCCCACCAAGCCCATAACCATCTCCACCACGGCCACGACCACCTTCCACCACCCATGTTTCCGTCGCTCCCTCCTCAGCCCTCGCCGCCCAGCTTCCATCCACCCTTCCCTCCACCACATGTATGTACCCATCTCCAAGCTCACTCCTCCTCCGGCCACCACCACCGCCACCCCTCTCATCAGCCGCATTTACTACGTCACTGCGGAGCAACTTCGTCGCATGCAGTCACTAGCCGATGAAACCAGCAACGATAGCGCTAAATACACAAAGCTCGAGTCTTTCTCCGCGTTCTTGTGGAAGATGGTTGCTCGTGCAGCTTCAAGAGACATCAATGGCAAAAGGGTCATTGCTAAAATGGGCATCGTGGTTGATGGAAGGAAGAGGCTTGGTAATAGTGGTGGTGGCGATACAGGGAGAGAAGCAATGATGGATTGTTATTTTGGGAATGTTCTTTCCATACCCTTTGGTGGGAAACCGGTGGAGGAGCTGGTGGAGAAGCCGTTGGGGTGGGTGGCGGATGAGGTTCACGAGTTCTTAGCGGTGGCGGCCACGGAGGAGCACTTCTTGGGGCTCATTGATTGGGTGGAAACGCACCGGCCGGTCCCCGGGTTGGCAAGGATTTATTGCGGTGGCGCCGACGAGGGACCAGCTTTTGTGGTGTCTTCCGGGCAAAGGTTCCCGGAGGAGAAGGTGAACTTTGGGTGGGGGAAGGTTGTGTTTGCATCATACCATTTTCCTTGGGGCGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTGAGAAGGGACAATTGGAGATCATTGAATCTGAGGCTGCTCATGTCTTTAGGCCGTTAACTTGGGATTATCTTAATCAATGA 1467 0.5147 MGVENGEFTVSVTKEEVVAAVLPIQEHWLPLSNLDLLLPPVDVGVFFCYKNPMFMSTTLGNGSTDTNNMMSFGSMVGSLKKGLAQALVSYYAFAGEVVPNTVGEPELLCNNRGVDFVEAVADVELKCLNFYNPDDTFEDKLVPKKKHGVLAVQATSLKCGGIVVACTFDHRIADAYSANMFLVSWAHMAQPTKPITISTTATTTFHHPCFRRSLLSPRRPASIHPSLHHMYVPISKLTPPPATTTATPLISRIYYVTAEQLRRMQSLADETSNDSAKYTKLESFSAFLWKMVARAASRDINGKRVIAKMGIVVDGRKRLGNSGGGDTGREAMMDCYFGNVLSIPFGGKPVEELVEKPLGWVADEVHEFLAVAATEEHFLGLIDWVETHRPVPGLARIYCGGADEGPAFVVSSGQRFPEEKVNFGWGKVVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLEKGQLEIIESEAAHVFRPLTWDYLNQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4953g00010 488 Gene3D - 234 473 IPR023213 -
Gabi4953g00010 488 Pfam Transferase family 9 476 - -
Gabi4953g00010 488 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 449 - -
Gabi4953g00010 488 Gene3D - 7 233 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4953g00010 Gabi-Chr4953 121597 126292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4953g00010 19 471 Monolignol Biosynthesis Gene Families AT5G48930 26.947 2.69e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4953g00010 - - gmx:100785067 738.413