Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4953g00008 ATGGTAGTGAAGGTGTTTGGCCCAACCTATGCTTCCCCAAAACGGGTTATGGTGTGTCTGATTGAGAAGGGAATTGAGTTTGAAACGGTACCTGTTGATATCTTCAAGGGGGAACACAAAGATCCTGAGTTCCTCAAGTTGCAGCCTTTTGGAGCGCTTCCAGTTATTCAAGATGGTGATTATACTCTCTATGAATCTCGTGCAATAATCAGATACTATGCAGAAAAGTATAAATCCCAAGGGACTGACTTGTTGGGGAAAACAATAGAAGAAAGGGGTCTTGTGGAACAATGGCTTGAAGTTGAAGCACATAGCTTTCACCCGCCAATCCTCAACTTAGTTATGAATGTTCTGTTTGCCCCATTAATGGGTGTTCCTTCAGACCAAAAAGTGATTGAAGAGAGTGATGAAAAGCTTGGGAAGGTGCTGGATATTTATGAGGAGAGGCTATCAAAGACCAAGTACTTAGCAGGTGATTTCTTCAGCCTTGCTGATCTTAGCCATCTCTCATTTGGTCATTATTTGGTGAATCAAACTGGAAGAGGGAATATGGTAAGAGAGAGGAAACATGTGAGTGCTTGGTGGGATGATATTAGTAGCAGACCATCTTGGAAGAAGGTTCTACAGCTATACAAATACCCTGTCTAG 648 0.4228 MVVKVFGPTYASPKRVMVCLIEKGIEFETVPVDIFKGEHKDPEFLKLQPFGALPVIQDGDYTLYESRAIIRYYAEKYKSQGTDLLGKTIEERGLVEQWLEVEAHSFHPPILNLVMNVLFAPLMGVPSDQKVIEESDEKLGKVLDIYEERLSKTKYLAGDFFSLADLSHLSFGHYLVNQTGRGNMVRERKHVSAWWDDISSRPSWKKVLQLYKYPV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4953g00008 215 CDD GST_N_Phi 2 76 - -
Gabi4953g00008 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Gabi4953g00008 215 Gene3D - 86 208 - -
Gabi4953g00008 215 CDD GST_C_Phi 90 208 IPR034347 -
Gabi4953g00008 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Gabi4953g00008 215 Pfam Glutathione S-transferase, C-terminal domain 113 202 IPR004046 -
Gabi4953g00008 215 SFLD Main (cytGST) 10 201 - -
Gabi4953g00008 215 FunFam Glutathione S-transferase F2 2 85 - -
Gabi4953g00008 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 209 - -
Gabi4953g00008 215 Gene3D Glutaredoxin 1 85 - -
Gabi4953g00008 215 Pfam Glutathione S-transferase, N-terminal domain 2 74 IPR004045 -
Gabi4953g00008 215 FunFam Glutathione S-transferase F2 86 208 - -
Gabi4953g00008 215 SUPERFAMILY Thioredoxin-like 12 81 IPR036249 -
Gabi4953g00008 215 SFLD Glutathione Transferase (cytosolic) 10 201 IPR040079 -
Gabi4953g00008 215 SUPERFAMILY GST C-terminal domain-like 81 209 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4953g00008 Gabi-Chr4953 40849 42703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4953g00008 1 215 Glutathione S-transferase Gene Family AT2G30870 62.791 6.50e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4953g00008 K00799 - gmx:547589 392.889