Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4947g00010 ATGATTAACAGTGGAGTGTGCAGTTTTCGCACGTGCCTCCATTTCCCGGAGAGACCACTATTCCGAGAAGCTCCGCTCTCACTCGGTTGCCGGCGGCGGTTTCTCGTCACTGCCTCCGAAACGAAGAAGAAAGAGAAGGTGGTAGTGATTTCTGGACCCACCGGTTCCGGCAAGAGCCGCCTCGCCTTGGAACTCGCGAAGCGCCTCAACGGCGAAATCGTTAGTGCGGACTCTGTTCAGGTATATCGGGGTCTTGATGTTGGATCTGCAAAACCTTCCCCAAATGAAAGAAAGGAGGTACCGCATCATCTGGTTGACATACTGCACCCATCTGAAGACTACTCCGTTGGACAGTTTTTTGAGGACGCAAGGCAAGCTACAAGATGTATTCTTGACAATGGCCGTGTTCCCATAGTCGTTGGGGGCACTGGGTTGTATTTAAGATGGTTAATATATGGAAAGCCAGATGTGCCTATAGCCTCTCCAGAGATCACATCTGAAGTAGACCTAGAGTTAGCTGACCTACAGAGAAATGAAGACTGGGATACAGCTGTGCAATTGGTGGTAAAATCTGGTGATCCAAAGGCCCAACTTTTACCGCTGAATGATTGGTACCGGTTACGGCGTAGCCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGAAACAGGGTGATTGTAGTGTTGCTGATGGTTCTGAGTCATCTGATGTGAGCATAAATGCAATGGAAGAAACCAATTCGTCAGAGTTAGACTATGAATTTATGTGTTTTTTCCTTTCTAGCCAAAGACTTGACCTCTATAGATCAATTGATTATCGGTGTGAAGATATGCTATTAGGAAGGGATGGGATTTTGTCTGAGGCTCAATGGCTTCTTGATACAGGTCTTCATCCAAACTCCAATTCTGCAACACGAGCAATTGGATACAGACAAGTATTCCCTAATATTCTATTTCAGGCCATGGAGTACTTACTAAGATGCAGACAACAAGGGGGCCAGAGTTCAGTTGGGGAATTTTACAAATTCTTGTCTGAATTTCAGAGAGCATCACGGAATTTTGCGAAAAGACAATTGACATGGTTTCGCAACGAACGTATATACCACTGGCTTGATGCTTCTAAACCTCTGGAAACCGTTCTCAACTTCATTCTTAATGCATACCATGATTGGAATGGAAGTCTTCTTGTGCCTGAACACCTAAGAATGTTGAAAGATATTAATGGCCGAGAAACTACTAAACTTAAGTCTTATCGCACCCAAAATAGACATTTAGTGAACAGGGAAGATTGTTCTGATATTCTGGACTGGATAAGGAAGACTCAAAGTTGA 1362 0.4435 MINSGVCSFRTCLHFPERPLFREAPLSLGCRRRFLVTASETKKKEKVVVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPNERKEVPHHLVDILHPSEDYSVGQFFEDARQATRCILDNGRVPIVVGGTGLYLRWLIYGKPDVPIASPEITSEVDLELADLQRNEDWDTAVQLVVKSGDPKAQLLPLNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQGDCSVADGSESSDVSINAMEETNSSELDYEFMCFFLSSQRLDLYRSIDYRCEDMLLGRDGILSEAQWLLDTGLHPNSNSATRAIGYRQVFPNILFQAMEYLLRCRQQGGQSSVGEFYKFLSEFQRASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFILNAYHDWNGSLLVPEHLRMLKDINGRETTKLKSYRTQNRHLVNREDCSDILDWIRKTQS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4947g00010 453 Pfam IPP transferase 80 375 - -
Gabi4947g00010 453 Gene3D - 156 226 - -
Gabi4947g00010 453 FunFam tRNA dimethylallyltransferase 9 155 226 - -
Gabi4947g00010 453 Hamap tRNA dimethylallyltransferase [miaA]. 47 392 IPR018022 GO:0008033
Gabi4947g00010 453 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 47 224 IPR018022 GO:0008033
Gabi4947g00010 453 Gene3D - 44 444 IPR027417 -
Gabi4947g00010 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 206 IPR027417 -
Gabi4947g00010 453 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 388 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4947g00010 Gabi-Chr4947 118912 124894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4947g00010 50 299 C2H2 Transcription Factor Family AT2G27760 27.413 3.62e-18 84.7