Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4944g00010 ATGGCGAATGAGGTGGTTCTGCTAGATTTCTGGCCAAGTCCTTTTGGGATGAGGATTAGGATTGCACTTGCTGAAAAGGGCATCAAGTACGAGTACAAAGAAGAGGACTTGTGGAACAAGAGCCCTCTGCTACTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATCCATTCTGATCCTTACCAGAGAGCACAGGCTAGATTCTGGGCTGATTTTGTTGACAAGAAGATATATGAAATTGGAAAGCAGCTTTGGACAACAAAAGGAGAAGAACAAGAAGCTGCTAGGAAGGACTTCATAGATGCCATTAAATTGTTGGAGGAACAGCTTGGAGACAAGACTTATTTTGGTGGAGACAAGATTGGCTTTGTGGATTTAGCACTTGTTCCATTCTACTCTTGGTTTAAAGCTTATGAGACTTTTGGCAACTTCAAGACAGAGAGTGAGTGCCCCAAGTTTATTGCTTGGGTCAAGAGGTGCATGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGACCAGCATAAGGTCTATGAGTTCATTTTGGAGGTAAGGAAGAAGATGGGCATTGAGTAG 579 0.4335 MANEVVLLDFWPSPFGMRIRIALAEKGIKYEYKEEDLWNKSPLLLQMNPVHKKIPVLIHSDPYQRAQARFWADFVDKKIYEIGKQLWTTKGEEQEAARKDFIDAIKLLEEQLGDKTYFGGDKIGFVDLALVPFYSWFKAYETFGNFKTESECPKFIAWVKRCMQKESVSKSLPDQHKVYEFILEVRKKMGIE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4944g00010 192 CDD GST_N_Tau 5 61 - -
Gabi4944g00010 192 SUPERFAMILY GST C-terminal domain-like 55 189 IPR036282 -
Gabi4944g00010 192 FunFam Glutathione S-transferase U20 61 192 - -
Gabi4944g00010 192 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Gabi4944g00010 192 CDD GST_C_Tau 62 184 IPR045074 GO:0004364|GO:0006749
Gabi4944g00010 192 Pfam Glutathione S-transferase, C-terminal domain 95 161 - -
Gabi4944g00010 192 Gene3D Glutaredoxin 2 61 - -
Gabi4944g00010 192 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 61 181 IPR010987 -
Gabi4944g00010 192 SUPERFAMILY Thioredoxin-like 4 61 IPR036249 -
Gabi4944g00010 192 Gene3D - 62 192 - -
Gabi4944g00010 192 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 60 IPR045073 -
Gabi4944g00010 192 Pfam Glutathione S-transferase, N-terminal domain 6 61 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4944g00010 Gabi-Chr4944 83460 85074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4944g00010 1 188 Glutathione S-transferase Gene Family AT1G78380 62.326 2.69e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4944g00010 K00799 - gmx:547520 337.806