Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4944g00009 ATGGCGGATAAGGTGGTTCTCCTAGATTTCTGGCCAAGTCGTTTTGGGATGAGGGTTAGGATTGCACTTGCTGAAAAGGGTATTAAGTATGAGTACAAAGAAGAGGACTTGGGGAACAAGAGTTCTCTTCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATCCACAATGGCAACTCCATTTGTGAATCTCTCATTGCTGTTCAGTACATTGATGAGGTCTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTGCGAGAGAGCACAGGCTAGATTCTGGGCCGATTTTGTTGACAACAAGACATTTATCTCTCAAAGGTCATCGGCGGTGAAGGACGTCAAAGTCACTATAGTTGTCCCATCAAAGGTCATCGGCGGTGTCTGTGTAGTTGTCACGGTAGCTCTCAAAGGTCACCGGTGGTCCCATCATCCAATACTCAGGCACGATTTTGTCAAAACTCAGGTTCATCTTTTAAAAAAAAAAAAGATATTTCAGATTTATCACTGCGCTTTGGTTCTTGTGGTCATTCCAGAGTGA 552 0.4402 MADKVVLLDFWPSRFGMRVRIALAEKGIKYEYKEEDLGNKSSLLLQMNPVHKKIPVLIHNGNSICESLIAVQYIDEVWNDRSPLLPSDPCERAQARFWADFVDNKTFISQRSSAVKDVKVTIVVPSKVIGGVCVVVTVALKGHRWSHHPILRHDFVKTQVHLLKKKKIFQIYHCALVLVVIPE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4944g00009 183 SFLD Main.3: Omega- and Tau-like 2 114 IPR045073 -
Gabi4944g00009 183 Gene3D Glutaredoxin 1 84 - -
Gabi4944g00009 183 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Gabi4944g00009 183 FunFam Tau class glutathione S-transferase 1 87 - -
Gabi4944g00009 183 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 109 IPR045073 -
Gabi4944g00009 183 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Gabi4944g00009 183 Gene3D - 85 121 - -
Gabi4944g00009 183 CDD GST_N_Tau 5 78 - -
Gabi4944g00009 183 SFLD Glutathione Transferase (cytosolic) 2 114 IPR040079 -
Gabi4944g00009 183 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4944g00009 Gabi-Chr4944 49251 53262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4944g00009 1 111 Glutathione S-transferase Gene Family AT1G17180 69.369 1.69e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4944g00009 K00799 - gmx:547520 194.897