Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4944g00008 ATGGCGGATAAGGTGGTTCTCCTAGATTTCTGGCCAAGTCGTTTTGGGATGAGGGTTAGGATTGCACTTGCTGAAAAGGGTATTAAGTATGAGTACAAAGAAGAGGACTTGGGGAACAAGAGTTCTCTTCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATCCACAATGGCAACTCCATTTGTGAATCTCTCATTGCTGTTCAGTACATTGATGAGGTCTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTGCGAGAGAGCACAGGCTAGATTCTGGGCCGATTTTGTTGACAACAAGACATTTATCTCTCAAAGGTCATCGGCGGTGAAGGACGTCAAAGTCACTATAGTTGTCCCATCAAAGGTCATCGGCGGTGTCTGTGTAGTTGTCACGGTAGCTCTCAAAGGTCACCGGTGGTCCCATCATCCAATACTCAGGCACGATTTTGTCAAAACTCAGGTTCATCTTTTAAAAAAAAAAAAGATATTTCAGATTTATCACTGCGCTTTGGTTCTTGTGGTCATTCCAGGTGAGGTGCCGCGTACAAGGAGATTCCCTGCAAGAAAAGCTCCAACAACGTCTATAACTCCTACTACGTCTACAACTCCTACTGTGCAAACTCAAAATGTACAGCTCAATGAGAACCTACAAAATGGCATTGATAGGGTGGAAACACAACAACGTGAAATAGAAGGCCAACAAGATCAACCTTCTAATGAATCCCAGCAACAAAATGAAAGCAGACCTCCCTACCGGGCCAAGAGAGCATGCAATAATTATTGGGTGGTTGATGTTATAGATGAACAAGGAAGGGTTACCGAGGAAAGATTGCGTATTAGGGATGTTTTGGTTCTTTCAGAAGACAAGAGGGTGATGGTGCCATGGAATGAAGAGAACCAGCCTGTTTCTGATGCTGCTGCATTGTTGAATGGGTTTTTAGGACATCTTGCATGTAACACTAATATGTTCCCAATATCTTTCGATAGGTGGCCTCATGTACCTCCCTTGTATAAGCAGAATGCTTGGGAGAAGACTATAACGAAAAAGTTTAATGTTTATCATGAAGACCATCATGAATATTGTATGGGAAGTATGGGAAAGAAATGGAAGGATAATAGGTGGAGGCTGTGCAATTATTATTATCATAAAGATCTAAGTTATGAGCAAAACCTTGAGAATTATCCTGATGGTCTCACAAGAGAACAATGGGCTGGTTTTTTGCAATATAAGTTAAGTGACAAAGCCAAGAAATACAGTGAGATAAATACTAAAAATAGAGCAAAGCAGACCATTATGCATACACTTGGATCAAAAAGCATTGCAAGGACAAAATATGACCTGGAACAAAAACATGGACGCAAATTCAGTAGGGGGAAATGTGGGAAATTTCGCATACGAAAAAGGATGGCAATTTAA 1434 0.4135 MADKVVLLDFWPSRFGMRVRIALAEKGIKYEYKEEDLGNKSSLLLQMNPVHKKIPVLIHNGNSICESLIAVQYIDEVWNDRSPLLPSDPCERAQARFWADFVDNKTFISQRSSAVKDVKVTIVVPSKVIGGVCVVVTVALKGHRWSHHPILRHDFVKTQVHLLKKKKIFQIYHCALVLVVIPGEVPRTRRFPARKAPTTSITPTTSTTPTVQTQNVQLNENLQNGIDRVETQQREIEGQQDQPSNESQQQNESRPPYRAKRACNNYWVVDVIDEQGRVTEERLRIRDVLVLSEDKRVMVPWNEENQPVSDAAALLNGFLGHLACNTNMFPISFDRWPHVPPLYKQNAWEKTITKKFNVYHEDHHEYCMGSMGKKWKDNRWRLCNYYYHKDLSYEQNLENYPDGLTREQWAGFLQYKLSDKAKKYSEINTKNRAKQTIMHTLGSKSIARTKYDLEQKHGRKFSRGKCGKFRIRKRMAI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4944g00008 477 Gene3D Glutaredoxin 1 84 - -
Gabi4944g00008 477 MobiDBLite consensus disorder prediction 195 212 - -
Gabi4944g00008 477 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Gabi4944g00008 477 SFLD Glutathione Transferase (cytosolic) 6 107 IPR040079 -
Gabi4944g00008 477 Pfam Plant transposase (Ptta/En/Spm family) 407 464 IPR004252 -
Gabi4944g00008 477 CDD GST_N_Tau 5 78 - -
Gabi4944g00008 477 Gene3D - 85 120 - -
Gabi4944g00008 477 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Gabi4944g00008 477 SFLD Main (cytGST) 6 107 - -
Gabi4944g00008 477 Coils Coil 215 242 - -
Gabi4944g00008 477 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Gabi4944g00008 477 MobiDBLite consensus disorder prediction 236 255 - -
Gabi4944g00008 477 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 108 IPR045073 -
Gabi4944g00008 477 MobiDBLite consensus disorder prediction 191 212 - -
Gabi4944g00008 477 FunFam Tau class glutathione S-transferase 1 87 - -
Gabi4944g00008 477 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4944g00008 Gabi-Chr4944 42708 53272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4944g00008 1 111 Glutathione S-transferase Gene Family AT1G17180 69.369 1.04e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4944g00008 K00799 - nta:107815048 213.386