Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4944g00006 ATGGCGGATAAGGTGGTTCTCCTAGATTTCTGGCCAAGTCGTTTTGGGATGAGGGTTAGGATTGCACTTGCTGAAAAGGGTATTAAGTATGAGTACAAAGAAGAGGACTTGGGGAACAAGAGTTCTCTTCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATCCACAATGGCAACTCCATTTGTGAATCTCTCATTGCTGTTCAGTACATTGATGAGGTCTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTGCGAGAGAGCACAGGCTAGATTCTGGGCCGATTTTGTTGACAACAAGATAAATGATATTGGAAGGAAGCTTTGGACAACAAAAGGAGAAGAACAAGAAGCTGCCAAGAAGGACTTCATGGATGCCATTAAATTGTTGGAGGAACAGCTTGGAGACAAGACTTACTTTGGTGGAGACAAGATTGGCCTTGTGGATTTAGCACTTGTTCCATTCTACACTTGGTTTAAAGCTTATGAGACTTTTGGCAACTTCAAGACAGAGAGTGAGTGCCCCAAGTTCATTGCTTGGGTCAAGAGGTGCATGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGACCAGCATAAGGTCTATGAGTTCATTTTGGAGGTAAGGAAGAAGATGGGCATTGAGTAG 660 0.4364 MADKVVLLDFWPSRFGMRVRIALAEKGIKYEYKEEDLGNKSSLLLQMNPVHKKIPVLIHNGNSICESLIAVQYIDEVWNDRSPLLPSDPCERAQARFWADFVDNKINDIGRKLWTTKGEEQEAAKKDFMDAIKLLEEQLGDKTYFGGDKIGLVDLALVPFYTWFKAYETFGNFKTESECPKFIAWVKRCMQKESVSKSLPDQHKVYEFILEVRKKMGIE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4944g00006 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Gabi4944g00006 219 Gene3D - 88 219 - -
Gabi4944g00006 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Gabi4944g00006 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Gabi4944g00006 219 FunFam Tau class glutathione S-transferase 1 87 - -
Gabi4944g00006 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Gabi4944g00006 219 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Gabi4944g00006 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Gabi4944g00006 219 CDD GST_N_Tau 5 78 - -
Gabi4944g00006 219 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Gabi4944g00006 219 Gene3D Glutaredoxin 1 87 - -
Gabi4944g00006 219 FunFam Glutathione S-transferase U20 88 219 - -
Gabi4944g00006 219 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Gabi4944g00006 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Gabi4944g00006 219 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4944g00006 Gabi-Chr4944 41413 53232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4944g00006 1 216 Glutathione S-transferase Gene Family AT1G78380 68.519 2.73e-113 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4944g00006 K00799 - gmx:547520 389.423