Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4944g00001 ATGGCGGATGAGGTGGTTCTGCTAGATTTCTGGCCAAGTCCCTTTGGGATGAGGGTTAGGATTGCACTTGCTGAGAAGGGTATCAAGTATGAGAACAAAGAAGAGGACTTGAGGAACAAGAGTCCTCTGCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATCCACAATGGCAAATCTCCTTTGTTGCCTTCTGATCCTTACCAGAGAGCACAGGCTAGATTCTGGGCCGATTTTGTTGACAAGAAGGTATACCCTTTTGCGAAGCTTTGGACAAAAAAAGGAGAAGAACAAGAAGCTGCCAAGAAGGACTTCATAGATGCCATTAAATTGTTGGAGGAACAGCTTGGAGACAAGACTTATTTTGGAGGAGACAAGATTGGCTTTGTGGATTTAGCACTTGTTCCATTCTACTCTTGGTTTAAAGCTTATGAGACTTTTGGCAACTTCAAGACAGAGAGTGAGTGCCCCAAGTTTATTGCTTGGGCCAAGAGGTGCATGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGAACAGGAAAAAGTCTATGATTTCATTGTGGAGAGAAGAAAGAGGATGGGTATTGAGTAG 600 0.44 MADEVVLLDFWPSPFGMRVRIALAEKGIKYENKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKSPLLPSDPYQRAQARFWADFVDKKVYPFAKLWTKKGEEQEAAKKDFIDAIKLLEEQLGDKTYFGGDKIGFVDLALVPFYSWFKAYETFGNFKTESECPKFIAWAKRCMQKESVSKSLPEQEKVYDFIVERRKRMGIE 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4944g00001 199 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 69 188 IPR010987 -
Gabi4944g00001 199 Pfam Glutathione S-transferase, C-terminal domain 102 168 - -
Gabi4944g00001 199 SUPERFAMILY GST C-terminal domain-like 61 196 IPR036282 -
Gabi4944g00001 199 SUPERFAMILY Thioredoxin-like 5 88 IPR036249 -
Gabi4944g00001 199 Gene3D Glutaredoxin 1 69 - -
Gabi4944g00001 199 Gene3D - 70 199 - -
Gabi4944g00001 199 Pfam Glutathione S-transferase, N-terminal domain 6 62 IPR004045 -
Gabi4944g00001 199 CDD GST_N_Tau 5 68 - -
Gabi4944g00001 199 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 91 IPR004045 -
Gabi4944g00001 199 SFLD Glutathione Transferase (cytosolic) 63 171 IPR040079 -
Gabi4944g00001 199 CDD GST_C_Tau 70 192 IPR045074 GO:0004364|GO:0006749
Gabi4944g00001 199 FunFam Glutathione S-transferase U20 69 199 - -
Gabi4944g00001 199 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 187 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4944g00001 Gabi-Chr4944 7513 8755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4944g00001 1 199 Glutathione S-transferase Gene Family AT1G17180 63.014 1.07e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4944g00001 K00799 - gmx:547520 347.436