Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4943g00001 ATGGAGAGTCAGCAATTCACGGGTTTGAGGTCTAACTATGAAATGGATGAAAATTCATTTGCACCTTTGTGCCAATTTTCTTCATATGATCGTATCAGGGATAATTCTAATGATGAATATCTTGCATTGGGTTGGCCATATGGATTTTCAATGCAAAATAGCAATCCTGATACTATCACTTTTATGGATTGTTATTATCCTGACATTTTATATGAAACTCTTCCCACTGAACCAATACCAATAAGTGTACAACAAGACTATGATTTTGGTGATGTTAAAGAAATACTTTCTGTGTGGAATGAAGTGGATGCTGGATTTGGTTCAGATAAACCTGTGCATTCATTATGTAACAATGGAGAAAGCGTTAAGGAAATGAAGGAAGATTTAAAGGGTAAGCGATGCAGAGAAGAGAAAAGTAGCAGTGCCAGAATGTTATCAAGAAAGACTCTTTCTCAGTATTTCTACATGCCAATATCACAAGCAGCCAGAGAGCTCAATGTTGGTTTGACACATTTGAAGAAAATGTGCAGGGAGTTAGGAATTCAGAGGTGGCCCCATAGGAAGCTAATGAGCCTTCAAACACTAATAAAGAATGTACAAGAACAAGGAGATCAAGAGGGAAATGGAAGTGATGAAAAAATAAGGAATGCCATTGAGATATTGGAGAATGAAAAGAAGATGGTGGAGGAAATGCCAGATTTGCAACTTGATGATAATACGAAAAGGCTTAGACAAGCTTGTTTTAAGGCCAACTATAAGAAGAGGAAGCTCATGGTCATGAGTTCGATGGAACCGTAG 798 0.3747 MESQQFTGLRSNYEMDENSFAPLCQFSSYDRIRDNSNDEYLALGWPYGFSMQNSNPDTITFMDCYYPDILYETLPTEPIPISVQQDYDFGDVKEILSVWNEVDAGFGSDKPVHSLCNNGESVKEMKEDLKGKRCREEKSSSARMLSRKTLSQYFYMPISQAARELNVGLTHLKKMCRELGIQRWPHRKLMSLQTLIKNVQEQGDQEGNGSDEKIRNAIEILENEKKMVEEMPDLQLDDNTKRLRQACFKANYKKRKLMVMSSMEP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4943g00001 265 ProSiteProfiles RWP-RK domain profile. 126 213 IPR003035 -
Gabi4943g00001 265 PANTHER PROTEIN RKD4 137 263 IPR044607 GO:0003700
Gabi4943g00001 265 Pfam RWP-RK domain 145 192 IPR003035 -
Gabi4943g00001 265 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4943g00001 Gabi-Chr4943 30802 31897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4943g00001 29 262 AtRKD Transcription Factor Family AT1G18790 44.094 1.50e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gabi4943g00001 RWP-RK 1.9e-21 No_clan