Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4938g00002 ATGGATATTAGTAAATCTTCTGCTCTCTTGTTGCTCCTCCTTTCCTTCACCTCATTTCTTCTGACATGTCGCTCAGCCCCAATAAAGACTTACATTGTGTACACTGGGAACAGCATGAAGGATGAAGCTTCTGCATTGACCCTTTACACAAGCATGCTACAAGAAGTTGCAGACAGCAATGCCGAGCCCAAGTCAGTACTGCACCACTACAAACGTAGTTTCAGTGGCTTTGTTGTGAAGCTAACAGAGGAGGAAGCCGATAGAATGGCTGGACTTGATGGAGTGGTGTCTGTATTTCCTAATGAGAAAAGACAACTCCATACAACAAGGTCTTGGGATTTTATTGGCTTTCCACTACAAGCTGAAAGAGGACCAACTAAAAGTGATGTCATTGTTGGAGTACTTGACTCTGGAATCTGGCCAGAATCTGAGAGTTTCAATGATAAAGGATTTGGCCCAGCACCTAGTAAATGGAAGGGCACATGCCAAACGTCTAATTTCACTTGCAATAATAAAATCATTGGGGCTAAGTATTACAGAGCTGATGGTTCATTTAGTGATGAAGATTTAAAATCTCCAAGGGATTCAGATGGTCATGGCACTCATACAGCATCAATAGCAGCAGGGAACCCAGTTAACACAGTGAGTATGTTGGGCCTTGGACAAGGAACAGCAAGAGGTGGAGCTACATCAGCACGCATTGCTGTCTATAAAGTATGTTGGATTGATGGATGTTATGATGCGGACATACTTGCTGGGTTTGATGATGCAATTGCTGATGGGGTTGACATAATATCAATTTCAATTGGAGGGTTCAATGATAAGGACTATTTTAGGGATGGATTAGCCATTGGAGCATTTCATGCTGTGAGAAATGGAGTATTGACAACAACTTCAGCTGGGAACTCGGGTCCAAAACTTTCATCATTAGCAAATTTTGCACCTTGGTTAATATCTGTGGCTGCTAGCACCATAGACAGGAAGTTTGTTACCAAGGTTGAATTAGGTAACAACAGAACTTTTGAGGGAATCTCAATAAATTCATTTGACCTTAAGGGAGAATTGTATCCTATAATATATGGTGGAGATGCACCAAACACTAATGGAGGCTACGATGGATCTATATCCAGGTTTTGCTCTGGTGGTACGTTGGACAAAAATAAAGTCAAGGGCAAAATTGTTCTCTGTGAAGGGAGAAGCCTAGCGCAAGGACCTTTCTATGCTGGTGCTGTTGGAGCACTGTTACAAAGTCAATCTTTTAGAGATGATCCTCCCTCTCTTCCTCTTCCAGGATCTTACCTTGACTTGCTGGATGGTACCTCCGTGTATAACTACTTAAACTCTACAAGTACACCAACTGCAACCATATTTAAGAGTGATGAAATGAAAGATACTTTGGCACCTGTTGTGGTCTCTTTCTCCTCAAGGGGTCCAAATCATGTTACACCTGAAATTCTCAAGCCTGATTTAGTGGCTCCAGGAGTTTCTATTCTAGCTAGTTGGTCTCCAATTTCCCCTCCTTCTGATATTGAAGGTGACAACAGAACATTACAATTCAACATTATCTCAGGAACATCAATGTCATGCCCACATGTTGCTGGGGCAGCAGCATATGTTAAATCATTTCATCCAATGTGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACAACAGCTAAGCAGCTTAATCCCAGGATTAACCGTGATGCAGAATTCGCATATGGTGCAGGCCAAATTGATCCTTTGAAGGCTGTGAATCCCGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGGGTTTTATGTGGACAAGGCTATAGTTCCAGGATTATACAACTTATCACAGGAGATAATAGTAGCTGCTCTGAAACAACTTATGGAACAGCAAGGGATTTGAACTATCCTTCATTTGCTCTTCAAGTGCCACCCTCTAATTCCAGTGTAAGTGGCGGTTATAATAGGACTGTAACAAATGTTGGGTTTTCAATGTCCAAATATAAAGCTATTGTGACTGCTCCACAAGGACTAAAAATTGTAGTGAACCCTAGTGTTCTATCATTCACTTCTCTTAACCAAAAGCAAACATTTGTGCTCACAATTGAGGGAACAATGGAAGCATCCCTAGTGTCAGCCTCTTTGGTTTGGGATGATGGTAAATTCCAAGTTAGGAGCCCCATTATTGTGTTTAATACACCATAA 2202 0.4155 MDISKSSALLLLLLSFTSFLLTCRSAPIKTYIVYTGNSMKDEASALTLYTSMLQEVADSNAEPKSVLHHYKRSFSGFVVKLTEEEADRMAGLDGVVSVFPNEKRQLHTTRSWDFIGFPLQAERGPTKSDVIVGVLDSGIWPESESFNDKGFGPAPSKWKGTCQTSNFTCNNKIIGAKYYRADGSFSDEDLKSPRDSDGHGTHTASIAAGNPVNTVSMLGLGQGTARGGATSARIAVYKVCWIDGCYDADILAGFDDAIADGVDIISISIGGFNDKDYFRDGLAIGAFHAVRNGVLTTTSAGNSGPKLSSLANFAPWLISVAASTIDRKFVTKVELGNNRTFEGISINSFDLKGELYPIIYGGDAPNTNGGYDGSISRFCSGGTLDKNKVKGKIVLCEGRSLAQGPFYAGAVGALLQSQSFRDDPPSLPLPGSYLDLLDGTSVYNYLNSTSTPTATIFKSDEMKDTLAPVVVSFSSRGPNHVTPEILKPDLVAPGVSILASWSPISPPSDIEGDNRTLQFNIISGTSMSCPHVAGAAAYVKSFHPMWSPAAIRSALMTTAKQLNPRINRDAEFAYGAGQIDPLKAVNPGLVYDAGEIDYVRVLCGQGYSSRIIQLITGDNSSCSETTYGTARDLNYPSFALQVPPSNSSVSGGYNRTVTNVGFSMSKYKAIVTAPQGLKIVVNPSVLSFTSLNQKQTFVLTIEGTMEASLVSASLVWDDGKFQVRSPIIVFNTP 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4938g00002 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 729 IPR045051 -
Gabi4938g00002 733 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Gabi4938g00002 733 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Gabi4938g00002 733 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Gabi4938g00002 733 CDD PA_subtilisin_like 333 456 - -
Gabi4938g00002 733 SUPERFAMILY Subtilisin-like 106 589 IPR036852 GO:0004252|GO:0006508
Gabi4938g00002 733 ProSiteProfiles Serine proteases, subtilase domain profile. 111 585 - -
Gabi4938g00002 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 107 IPR037045 -
Gabi4938g00002 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Gabi4938g00002 733 Pfam Subtilase family 128 575 IPR000209 GO:0006508|GO:0008236
Gabi4938g00002 733 Gene3D - 326 463 - -
Gabi4938g00002 733 FunFam Subtilisin-like protease SBT1.5 129 343 - -
Gabi4938g00002 733 Pfam Fibronectin type-III domain 632 729 IPR041469 -
Gabi4938g00002 733 Pfam Peptidase inhibitor I9 30 107 IPR010259 -
Gabi4938g00002 733 Gene3D Peptidase S8/S53 domain 129 598 IPR036852 GO:0004252|GO:0006508
Gabi4938g00002 733 CDD Peptidases_S8_3 105 559 IPR034197 -
Gabi4938g00002 733 Gene3D - 602 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4938g00002 Gabi-Chr4938 19830 25206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4938g00002 29 732 Subtilisin-like Serine Gene Family AT5G59120 47.288 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4938g00002 - - gmx:547512 1130.16