Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4938g00001 ATGAAGGATGAAGCTTCTGCATTGACCCTTTACACAAGCATGCTACAAGAAGTTGCAGACAGCAATGCCGAGCCCAAGTCAGTACTGCACCACTACAAACGTAGTTTCAGTGGCTTTGTTGTGAAGCTAACAGAGGAGGAAGCCGATAGAATGGCTGGACTTGATGGAGTGGTGTCTGTATTTCCTAATGAGAAAAGACAACTCCATACAACAAGGTCTTGGGATTTTATTGGCTTTCCACTACAAGCTGAAAGAGGACCAACTAAAAGTGATGTCATTGTTGGAGTACTTGACTCTGGAATCTGGCCAGAATCTGAGAGTTTCAATGATAAAGGATTTGGCCCAGCACCTAGTAAATGGAAGGGCACATGCCAAACGTCTAATTTCACTTGCAATAATAAAATCATTGGGGCTAAGTATTACAGAGCTGATGGTTCATTTAGTGATGAAGATTTAAAATCTCCAAGGGATTCAGATGGTCATGGCACTCATACAGCATCAATAGCAGCAGGGAACCCAGTTAACACAGTGAGTATGTTGGGCCTTGGACAAGGAACAGCAAGAGGTGGAGCTACATCAGCACGCATTGCTGTCTATAAAGTATGTTGGATTGATGGATGTTATGATGCGGACATACTTGCTGGGTTTGATGATGCAATTGCTGATGGGGTTGACATAATATCAATTTCAATTGGAGGGTTCAATGATAAGGACTATTTTAGGGATGGATTAGCCATTGGAGCATTTCATGCTGTGAGAAATGGAGTATTGACAACAACTTCAGCTGGGAACTCGGGTCCAAAACTTTCATCATTAGCAAATTTTGCACCTTGGTTAATATCTGTGGCTGCTAGCACCATAGACAGGAAGTTTGTTACCAAGGTTGAATTAGGTAACAACAGAACTTTTGAGGGAATCTCAATAAATTCATTTGACCTTAAGGGAGAATTGTATCCTATAATATATGGTGGAGATGCACCAAACACTAATGGAGGCTACGATGGATCTATATCCAGGTTTTGCTCTGGTGGTACGTTGGACAAAAATAAAGTCAAGGGCAAAATTGTTCTCTGTGAAGGGAGAAGCCTAGCGCAAGGACCTTTCTATGCTGGTGCTGTTGGAGCACTGTTACAAAGTCAATCTTTTAGAGATGATCCTCCCTCTCTTCCTCTTCCAGGATCTTACCTTGACTTGCTGGATGGTACCTCCGTGTATAACTACTTAAACTCTACAAGTACACCAACTGCAACCATATTTAAGAGTGATGAAATGAAAGATACTTTGGCACCTGTTGTGGTCTCTTTCTCCTCAAGGGGTCCAAATCATGTTACACCTGAAATTCTCAAGCCTGATTTAGTGGCTCCAGGAGTTTCTATTCTAGCTAGTTGGTCTCCAATTTCCCCTCCTTCTGATATTGAAGGTGACAACAGAACATTACAATTCAACATTATCTCAGGAACATCAATGTCATGCCCACATGTTGCTGGGGCAGCAGCATATGTTAAATCATTTCATCCAATGTGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACAACAGCTAAGCAGCTTAATCCCAGGATTAACCGTGATGCAGAATTCGCATATGGTGCAGGCCAAATTGATCCTTTGAAGGCTGTGAATCCCGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGGGTTTTATGTGGACAAGGCTATAGTTCCAGGATTATACAACTTATCACAGGAGATAATAGTAGCTGCTCTGAAACAACTTATGGAACAGCAAGGGATTTGAACTATCCTTCATTTGCTCTTCAAGTGCCACCCTCTAATTCCAGTGTAAGTGGCGGTTATAATAGGACTGTAACAAATGTTGGGTTTTCAATGTCCAAATATAAAGCTATTGTGACTGCTCCACAAGGACTAAAAATTGTAGTGAACCCTAGTGTTCTATCATTCACTTCTCTTAACCAAAAGCAAACATTTGTGCTCACAATTGAGGGAACAATGGAAGCATCCCTAGTGTCAGCCTCTTTGGTTTGGGATGATGGTAAATTCCAAGTTAGGAGCCCCATTATTGTGTTTAATACACCATAA 2088 0.4148 MKDEASALTLYTSMLQEVADSNAEPKSVLHHYKRSFSGFVVKLTEEEADRMAGLDGVVSVFPNEKRQLHTTRSWDFIGFPLQAERGPTKSDVIVGVLDSGIWPESESFNDKGFGPAPSKWKGTCQTSNFTCNNKIIGAKYYRADGSFSDEDLKSPRDSDGHGTHTASIAAGNPVNTVSMLGLGQGTARGGATSARIAVYKVCWIDGCYDADILAGFDDAIADGVDIISISIGGFNDKDYFRDGLAIGAFHAVRNGVLTTTSAGNSGPKLSSLANFAPWLISVAASTIDRKFVTKVELGNNRTFEGISINSFDLKGELYPIIYGGDAPNTNGGYDGSISRFCSGGTLDKNKVKGKIVLCEGRSLAQGPFYAGAVGALLQSQSFRDDPPSLPLPGSYLDLLDGTSVYNYLNSTSTPTATIFKSDEMKDTLAPVVVSFSSRGPNHVTPEILKPDLVAPGVSILASWSPISPPSDIEGDNRTLQFNIISGTSMSCPHVAGAAAYVKSFHPMWSPAAIRSALMTTAKQLNPRINRDAEFAYGAGQIDPLKAVNPGLVYDAGEIDYVRVLCGQGYSSRIIQLITGDNSSCSETTYGTARDLNYPSFALQVPPSNSSVSGGYNRTVTNVGFSMSKYKAIVTAPQGLKIVVNPSVLSFTSLNQKQTFVLTIEGTMEASLVSASLVWDDGKFQVRSPIIVFNTP 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4938g00001 695 Pfam Peptidase inhibitor I9 4 69 IPR010259 -
Gabi4938g00001 695 Gene3D - 564 693 - -
Gabi4938g00001 695 ProSiteProfiles Serine proteases, subtilase domain profile. 73 547 - -
Gabi4938g00001 695 Pfam Subtilase family 90 537 IPR000209 GO:0006508|GO:0008236
Gabi4938g00001 695 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 69 IPR037045 -
Gabi4938g00001 695 CDD Peptidases_S8_3 67 521 IPR034197 -
Gabi4938g00001 695 PRINTS Subtilisin serine protease family (S8) signature 89 108 IPR015500 -
Gabi4938g00001 695 PRINTS Subtilisin serine protease family (S8) signature 485 501 IPR015500 -
Gabi4938g00001 695 PRINTS Subtilisin serine protease family (S8) signature 157 170 IPR015500 -
Gabi4938g00001 695 FunFam Subtilisin-like protease SBT1.5 91 305 - -
Gabi4938g00001 695 Pfam Fibronectin type-III domain 594 691 IPR041469 -
Gabi4938g00001 695 CDD PA_subtilisin_like 295 418 - -
Gabi4938g00001 695 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 691 IPR045051 -
Gabi4938g00001 695 SUPERFAMILY Subtilisin-like 68 551 IPR036852 GO:0004252|GO:0006508
Gabi4938g00001 695 Gene3D Peptidase S8/S53 domain 91 560 IPR036852 GO:0004252|GO:0006508
Gabi4938g00001 695 ProSitePatterns Serine proteases, subtilase family, serine active site. 486 496 IPR023828 -
Gabi4938g00001 695 Gene3D - 288 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4938g00001 Gabi-Chr4938 19179 25206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4938g00001 11 694 Subtilisin-like Serine Gene Family AT5G59120 47.851 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4938g00001 - - gmx:547512 1100.5