Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4933g00008 ATGGCTCTTGTATCATCAGTTCTAATGCAATTGCCGTCTGAGCCAAAATCAATCCTTTTCTTTTCTATTTTGTGCTTCATAAGTGTTATTATGTTCATGCTTAAGCTCAAAAGAAAAAACAATTACAATCTGCCTCCATCCCCACCAAAGCTACCAATTATTGGAAATCTTCATCAACTAGGCACACTCCCACACCGCTCCTTGCAAACACTCTCTAAAAAGTATGGCCCTCTCATGTTGTTGCAGCTTGGACAAACAAAAACTCTTGTGGTTTCGTCGGCGGATATGGCCAGAGAAATAACAAAAACACATGATGTTGCTTTCTCCAACAGGCCTGAGTCTACAGTTGCTAAAATCTTTCTCCATGGATACGAGGATATTGGTTTTGCACCCTACGGCGAGGAGTGGAGACAAAAAAAGAAGATCTGTGTTCTTGAGCTTTTGAGCCAGAAAAGGGTGGGATCTTTTCACTCCATCAGACAAGAAGAAATTACAGAGTTGGTTGATACTATACGTGATGCATGTGCGAGTAAAAGATCCTCTGTGAATCTAAGGGAGATGTTGTTTGCAGCCTCAAACAATATAGTATCTAGATGTGTTCTTGGACAAAAATATGATACTCCAGATGGTACTACAAGCATTGGAGTGCTAGCAAGGAAGACTATGAAATTATTGGCAGCTTTCAGCGTTGGCGATTTCTTCCCTTCATTGGGTTGGATTGATGTTCTTACGGGCTTAATTTCAGAAATTAAGTCCACTTCTGCTGCATTAGATGCTTTCTTTGATGAGGTAATTGCACAACACAAGAGAAGCAACAAAAACGATGACAAAAACGATATTAAAGACTTTGCAGGGATCCTTCTTCAACTTCAAGAGGGTGGGAAGCTTGACTTTGAGCTTACACAAGATAACCTCAAAGCAATCCTAATGGACATGTACGTTGCTGGAAGTGACACTACTTCAACCAATCTGGAATGGGCTTTTGCTGAGCTCGTTAAGAATCCAAATACCATGAAGAAAGTCCAACAAGAGGTAAGAAGAGTTGTGGGGAAAAAATCAAAAGTGGATGAAAATGATGTGAATCAAATGAACTACTTGAAATGTGTAATCAAGGAAACTTTGAGATTACATCCACCCGTTCCCCTTTTGATTCCTCGAGAGACAATATCAAGTGTGAAACTAAAAGGGTATGATATTCCCCCCAAAACAAGGGTATTTATGAATGCATGGGCAATACAGAGAGACCCTGAATTATGGGACAATCCTGAAGAGTTTCTTCCCAAGAGATTTGAAGGTAACCAAGTTGATGTTAAAGGACAAGATTTTCAATTAATCCCATTTGGAATTGGGAGAAGGGGATGTCCTGGAATTTCGTTTGGGCTTGCTTCTACAGAGAATATACTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTACCTAAAACTGGTGTATTGATGCAGGACTTAGACATGAGTGAGGTGAATGGACTCACTGTCTCCAAGAAAATACCACTTCATCTTGAACCAATACTATACTCTTTTGGTTCTAAACCTTGA 1557 0.3982 MALVSSVLMQLPSEPKSILFFSILCFISVIMFMLKLKRKNNYNLPPSPPKLPIIGNLHQLGTLPHRSLQTLSKKYGPLMLLQLGQTKTLVVSSADMAREITKTHDVAFSNRPESTVAKIFLHGYEDIGFAPYGEEWRQKKKICVLELLSQKRVGSFHSIRQEEITELVDTIRDACASKRSSVNLREMLFAASNNIVSRCVLGQKYDTPDGTTSIGVLARKTMKLLAAFSVGDFFPSLGWIDVLTGLISEIKSTSAALDAFFDEVIAQHKRSNKNDDKNDIKDFAGILLQLQEGGKLDFELTQDNLKAILMDMYVAGSDTTSTNLEWAFAELVKNPNTMKKVQQEVRRVVGKKSKVDENDVNQMNYLKCVIKETLRLHPPVPLLIPRETISSVKLKGYDIPPKTRVFMNAWAIQRDPELWDNPEEFLPKRFEGNQVDVKGQDFQLIPFGIGRRGCPGISFGLASTENILANLLYWFDWKLPKTGVLMQDLDMSEVNGLTVSKKIPLHLEPILYSFGSKP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4933g00008 518 CDD CYP71-like 74 505 - -
Gabi4933g00008 518 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PANTHER CYTOCHROME P450 71B11-RELATED 29 509 - -
Gabi4933g00008 518 SUPERFAMILY Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Gabi4933g00008 518 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 FunFam Cytochrome P450 83B1 32 508 - -
Gabi4933g00008 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00008 518 Pfam Cytochrome P450 45 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4933g00008 Gabi-Chr4933 71464 73385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4933g00008 18 506 Cytochrome P450 AT3G48280 44.512 3.77e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4933g00008 K20617 - gmx:100792382 705.286