Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4933g00007 ATGGCTCTTGTATCATCAGTTCTAATGCAATTGCCGTCTGAGCCAAAATCAATCCTTTTCTTTTCTATTTTGTGCTTCATAAGTGTTATTATGTTCATGCTTAAGCTCAAAAGAAAAAACAATTACAATCTGCCTCCATCCCCACCAAAGCTACCAATTATTGGAAATCTTCATCAACTAGGCACACTCCCACACCGCTCCTTGCAAACACTCTCTAAAAAGTATGGCCCTCTCATGTTGTTGCAGCTTGGACAAACAAAAACTCTTGTGGTTTCGTCGGCGGATATGGCCAGAGAAATAACAAAAACACATGATGTTGCTTTCTCCAACAGGCCTGAGTCTACAGTTGCTAAAATCTTTCTCCATGGATACGAGGATATTGGTTTTGCACCCTACGGCGAGGAGTGGAGACAAAAAAAGAAGATCTGTGTTCTTGAGCTTTTGAGCCAGAAAAGGGTGGGATCTTTTCACTCCATCAGACAAGAAGAAATTACAGAGTTGGTTGATACTATACGTGATGCATGTGCGAGTAAAAGATCCTCTGTGAATCTAAGGGAGATGTTGTTTGCAGCCTCAAACAATATAGTATCTAGATGTGTTCTTGGACAAAAATATGATACTCCAGATGGTACTACAAGCATTGGAGTGCTAGCAAGGAAGACTATGAAATTATTGGCAGCTTTCAGCGTTGGCGATTTCTTCCCTTCATTGGGTTGGATTGATGTTCTTACGGGCTTAATTTCAGAAATTAAGTCCACTTCTGCTGCATTAGATGCTTTCTTTGATGAGGACATGTACGTTGCTGGAAGTGACACTACTTCAACCAATCTGGAATGGGCTTTTGCTGAGCTCGTTAAGAATCCAAATACCATGAAGAAAGTCCAACAAGAGGTAAGAAGAGTTGTGGGGAAAAAATCAAAAGTGGATGAAAATGATGTGAATCAAATGAACTACTTGAAATGTGTAATCAAGGAAACTTTGAGATTACATCCACCCGTTCCCCTTTTGATTCCTCGAGAGACAATATCAAGTGTGAAACTAAAAGGGTATGATATTCCCCCCAAAACAAGGGTATTTATGAATGCATGGGCAATACAGAGAGACCCTGAATTATGGGACAATCCTGAAGAGTTTCTTCCCAAGAGATTTGAAGGTAACCAAGTTGATGTTAAAGGACAAGATTTTCAATTAATCCCATTTGGAATTGGGAGAAGGGGATGTCCTGGAATTTCGTTTGGGCTTGCTTCTACAGAGAATATACTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTACCTAAAACTGGTGTATTGATGCAGGACTTAGACATGAGTGAGGTGAATGGACTCACTGTCTCCAAGAAAATACCACTTCATCTTGAACCAATACTATACTCTTTTGGTTCTAAACCTTGA 1416 0.399 MALVSSVLMQLPSEPKSILFFSILCFISVIMFMLKLKRKNNYNLPPSPPKLPIIGNLHQLGTLPHRSLQTLSKKYGPLMLLQLGQTKTLVVSSADMAREITKTHDVAFSNRPESTVAKIFLHGYEDIGFAPYGEEWRQKKKICVLELLSQKRVGSFHSIRQEEITELVDTIRDACASKRSSVNLREMLFAASNNIVSRCVLGQKYDTPDGTTSIGVLARKTMKLLAAFSVGDFFPSLGWIDVLTGLISEIKSTSAALDAFFDEDMYVAGSDTTSTNLEWAFAELVKNPNTMKKVQQEVRRVVGKKSKVDENDVNQMNYLKCVIKETLRLHPPVPLLIPRETISSVKLKGYDIPPKTRVFMNAWAIQRDPELWDNPEEFLPKRFEGNQVDVKGQDFQLIPFGIGRRGCPGISFGLASTENILANLLYWFDWKLPKTGVLMQDLDMSEVNGLTVSKKIPLHLEPILYSFGSKP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4933g00007 471 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS E-class P450 group I signature 361 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 Pfam Cytochrome P450 264 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 Pfam Cytochrome P450 45 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 CDD CYP71-like 74 458 - -
Gabi4933g00007 471 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PRINTS P450 superfamily signature 398 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 PANTHER CYTOCHROME P450 71B11-RELATED 264 462 - -
Gabi4933g00007 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
Gabi4933g00007 471 Gene3D Cytochrome P450 264 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 FunFam Predicted protein 266 460 - -
Gabi4933g00007 471 Gene3D Cytochrome P450 36 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4933g00007 471 SUPERFAMILY Cytochrome P450 45 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4933g00007 Gabi-Chr4933 71464 73385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4933g00007 18 459 Cytochrome P450 AT3G48280 42.418 3.41e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4933g00007 K20617 - gmx:100792382 641.343