Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4932g00002 ATGCCTCGTGGAACGCTTGAAGTTATTCTTGTTAGCGCAAAAGGGCTTCATGACAGTGATTTTTTCAAGAAAATGGATCCTTATGTGATCCTCACTTATAGGGCACAAGAACACAGAAGCAGTGTTGCTCAAGGTGCAGGATCTAATCCCAGTTGGAATGAAAGCTTCCTTTTTACAGTTTCTGACAATGTTTCTGAGCTTAATCTGAGGCTAATGGACAAAGATACGTTTACCAAGGATGATTTCCTTGGTGAGACAAATGGCAGTGAACTCAGCAAGGGTGAAGAGGAAAGCAAAATTGGTGGATGGAGAGAATCAGTCATAGATTACTAG 333 0.4144 MPRGTLEVILVSAKGLHDSDFFKKMDPYVILTYRAQEHRSSVAQGAGSNPSWNESFLFTVSDNVSELNLRLMDKDTFTKDDFLGETNGSELSKGEEESKIGGWRESVIDY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4932g00002 110 PANTHER C2 DOMAIN-CONTAINING 1 86 - -
Gabi4932g00002 110 MobiDBLite consensus disorder prediction 82 110 - -
Gabi4932g00002 110 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Gabi4932g00002 110 Gene3D C2 domain 2 103 IPR035892 -
Gabi4932g00002 110 Pfam C2 domain 4 104 IPR000008 -
Gabi4932g00002 110 MobiDBLite consensus disorder prediction 90 110 - -
Gabi4932g00002 110 SMART C2_3c 5 100 IPR000008 -
Gabi4932g00002 110 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 86 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4932g00002 Gabi-Chr4932 9629 10798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4932g00002 4 86 C2H2 Transcription Factor Family AT4G21160 34.940 1.86e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4932g00002 - - ahf:112794411 156.377