Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4932g00001 ATGCCTCGTGGAACGCTTGAAGTTATTCTTGTTAGCGCAAAAGGGCTTCATGACAGTGATTTTTTCAAGAAAATGGATCCTTATGTGATCCTCACTTATAGGGCACAAGAACACAGAAGCAGTGTTGCTCAAGGTGCAGGATCTAATCCCAGTTGGAATGAAAGCTTCCTTTTTACAGTTTCTGACAATGTTTCTGAGCTTAATTTGAGGCTAATGGACAAAGATACGTTTACCAAGGATGATTTCCTTGGTGAGGCAAAAATTAATTTGGAACCAGTGTTTGCTGAGGGTAGCATTCCACAAACTGTTTACAATGTTGTGAGGAATCAGAAATACAGTGGAGAAGTTAAGTTGGCTCTCACTTTTCATCCTGAGTGGCAGTGA 384 0.4062 MPRGTLEVILVSAKGLHDSDFFKKMDPYVILTYRAQEHRSSVAQGAGSNPSWNESFLFTVSDNVSELNLRLMDKDTFTKDDFLGEAKINLEPVFAEGSIPQTVYNVVRNQKYSGEVKLALTFHPEWQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4932g00001 127 PANTHER C2 DOMAIN-CONTAINING 1 123 - -
Gabi4932g00001 127 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Gabi4932g00001 127 Pfam C2 domain 4 98 IPR000008 -
Gabi4932g00001 127 Gene3D C2 domain 2 125 IPR035892 -
Gabi4932g00001 127 SMART C2_3c 5 102 IPR000008 -
Gabi4932g00001 127 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4932g00001 Gabi-Chr4932 2368 3796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4932g00001 4 94 C2H2 Transcription Factor Family AT4G21160 35.165 4.21e-14 65.5