Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi492g00007 ATGAGACAAGCTGGTGCATATTCAGGGTTACTATGTGGTGGCATATCAGGAAGGACAGGGCCTCATTCTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGAAATCTGGGGAGGATGTGAAAATGATATCAGGGGAAGCTCCCATTGTTTTCTCAAAGGCTTGTGAACTCTTCATTGAGGAGCTTACAAGAAGGTCTTGGATCATGGTCATCCAAGGCAAAAGGAGAACCTTGCACAAAGAGGATGTGGCCTCTGCTGTTATGACCACTGATATCTTTGACTTTTTGATCACTTTGGTTTCTAATTCTGGAAAACCTGTAGTTGGTGCTGCGGCCACTGTCATGGAAAATGAAACTTTGGAATAA 366 0.4344 MRQAGAYSGLLCGGISGRTGPHSLPLARIKKIMKKSGEDVKMISGEAPIVFSKACELFIEELTRRSWIMVIQGKRRTLHKEDVASAVMTTDIFDFLITLVSNSGKPVVGAAATVMENETLE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi492g00007 121 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 103 - -
Gabi492g00007 121 SUPERFAMILY Histone-fold 16 96 IPR009072 GO:0046982
Gabi492g00007 121 Gene3D Histone, subunit A 15 102 IPR009072 GO:0046982
Gabi492g00007 121 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Gabi492g00007 121 FunFam Nuclear transcription factor Y subunit C-3 15 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi492g00007 Gabi-Chr492 157777 158142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi492g00007 22 100 CCAAT-HAP5 Transcription Factor Family AT1G54830 67.089 5.71e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gabi492g00007 CBFD_NFYB_HMF 1.4e-18 CL0012