Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4923g00001 ATGAGGATGAAAAGGAAAGGAAGTGAGTGTGACGAGTCCTCGAAATTGACTGACATTTTGAGATCCAATCATGGGTCTCCGTCGTCCAATTTTGAGACCCATTATTCGATGGAAGATTGTTCGAGGTTGAAGAAGAGGTGTAGAGAAAATACTAAGATAGACTCAGCTGGTTCCTACAAGAGTAGGGTGGCGGGTTTTGCCACTGCTCCTCCTTGTGGGACATTGTCTCTGATGACCGCGGGAAGAGGCCTAAAGAGGAGGAAGATAGGTTGCATTGACGTGGCTACCCAGATGGGGAGGAAGAACAAGATTGAAGATGATTATGTTACTGGGGTGAGGATCGGGCAAGGAAAGTATGGATCTGTTTCGTTGTGTAGGTCTCTTGTTGGCGGCGCGGAGTATGCGTGTAAGACTCTGAAGAAGGGGGATGAGACTGTTTACAGGGAGGTGGAGATAATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTCTGCTGGCAGTGTATGAGGAAGCTGATTGCTCTCATCTGGTGATGGAATTGTGCTCTGGGGGAAAACTTGTCGACCAGATGTTTAGGGAGGGCCCTTGTTCTGAACAGCGGGCTGCTAATATACTTAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAGCCTGAGAATATTCTGCTTACTGCTTCGGGGGAAATAAAGCTTGCTGATTTTGGCCTGGCCATGAGAATTTCTAAGGGTCAGAACTTGACGGGTTTGGTTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGAGTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACGTACATTGAAGATCCTGCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTGCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAGGATGGATGATGGGTTCCTTAATGAGGTTTCAAGCCTTTCTTCATCATCTGAAAGTTGCAATTCAGAATATCATGATGTTTGTGTGTGGATTGATGCACTTGCCAATGCAATTTCACATGTAAGGATATCTGAACCAAAGAGGAGCAAGTTGTGGGCAGTTCCAATTCATCAGCAAGGTTTATATAACATGAGGGCTAACCTCTGTAAAGCATTTTGA 1404 0.4537 MRMKRKGSECDESSKLTDILRSNHGSPSSNFETHYSMEDCSRLKKRCRENTKIDSAGSYKSRVAGFATAPPCGTLSLMTAGRGLKRRKIGCIDVATQMGRKNKIEDDYVTGVRIGQGKYGSVSLCRSLVGGAEYACKTLKKGDETVYREVEIMQHLSGHPGVVTLLAVYEEADCSHLVMELCSGGKLVDQMFREGPCSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGEIKLADFGLAMRISKGQNLTGLVGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLEFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTERTLKILPVESKLKHQNGAACHNFVAAPEPRLGRNRMDDGFLNEVSSLSSSSESCNSEYHDVCVWIDALANAISHVRISEPKRSKLWAVPIHQQGLYNMRANLCKAF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4923g00001 467 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Gabi4923g00001 467 FunFam Maternal embryonic leucine zipper kinase 100 377 - -
Gabi4923g00001 467 MobiDBLite consensus disorder prediction 1 18 - -
Gabi4923g00001 467 CDD STKc_CAMK 107 355 - -
Gabi4923g00001 467 Pfam Protein kinase domain 109 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4923g00001 467 ProSiteProfiles Protein kinase domain profile. 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4923g00001 467 Gene3D Transferase(Phosphotransferase) domain 1 99 392 - -
Gabi4923g00001 467 MobiDBLite consensus disorder prediction 1 31 - -
Gabi4923g00001 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 95 381 - -
Gabi4923g00001 467 SUPERFAMILY Protein kinase-like (PK-like) 102 392 IPR011009 -
Gabi4923g00001 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gabi4923g00001 467 SMART serkin_6 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4923g00001 Gabi-Chr4923 7669 9982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4923g00001 98 356 EF-hand Containing Proteins AT4G35310 44.444 6.13e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi4923g00001 Pkinase 6.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4923g00001 - - gmx:100812729 679.093