Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4922g00005 ATGACGACGAGGTTCAAGAAGAACAGGAAGAAGAGAGGCCACGTCAGCGCCGGGCACGGTCGTATCGGGAAGCATCGTAAGCATCCCGGTGGTCGAGGAAACGCCGGAGGCATGCACCACCACCGAATCCTCTTCGACAAGTACCACCCTGGCTATTTCGGAAAGGTTGGGATGCGCTACTTCCACAAGCTCCGCAACAAGTTCCATTGCCCAATTATGAACATCGATAAGCTATGGTCCTTGGTTTTGGGGAAAGGGGTTTTGCCTCAGAATCAGCCACTCGTCGTTAAGGCAAAGCTCGTTTCAAAGATCGCCGAGAAGAAGATCAAGGAGGCTGGAGGAGCCGTTGTCCTCACCGCTTAG 363 0.5372 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPIMNIDKLWSLVLGKGVLPQNQPLVVKAKLVSKIAEKKIKEAGGAVVLTA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4922g00005 120 Gene3D - 83 120 - -
Gabi4922g00005 120 SUPERFAMILY Ribosomal proteins L15p and L18e 6 119 IPR036227 -
Gabi4922g00005 120 MobiDBLite consensus disorder prediction 1 36 - -
Gabi4922g00005 120 PANTHER 60S RIBOSOMAL PROTEIN L27A 82 120 - -
Gabi4922g00005 120 Gene3D - 58 82 - -
Gabi4922g00005 120 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4922g00005 Gabi-Chr4922 104371 105073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4922g00005 1 120 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 76.027 3.08e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4922g00005 K02900 - gmx:100527293 235.343