Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4921g00008 ATGGGTTGGAAGAGATCTGCTTTGGAGTACAAGAGAGTGAAGATCGTTGGACAAGTTCTATTGGGATTTTTGTTGATCTGCACAATTCAGATTTCAAGTGCAGTCACTGATCCCTCTGATGTTGCTGCAATTAATAGCTTATATGCTGCTTGGGGATCCCCTGTTCTGCCTGGGTGGGTTCCAAGTGGGGGAGATCCGTGCGGTGAAGGGTGGCAAGGCATTCAGTGTAATGGTTCATTCATACAAAAAATCGTTCTTAATGGTGCAAATTTGGGAGGAGAACTTGGTGATAAACTGGCAACGTTTGTTTCTATTTCAATAATTGAACTCAGCAACAACAACATTGGGGGAAGTATTCCATCCAATTTGCCAGTTACCTTGAAAAACTTATTTCTTTCAGCCAACCAGTTAACTGGAAGTATTCCAACCTCTTTATCCACTTTGACTGGACTGACTGACATGTCTCTTAACAACAATCTTTTAACTGGAGAAATACCAGATGCATTTCAGGCACTTCCACTATTGATCAATCTAGATTTATCTAATAATAGTTTGAGCGGGAAATTGCCTCCATCTGTAGAGAATTTGTCATCTTTGACCACCTTACGCTTGCAGAATAATAAACTGTCTGGGACACTTGATGTTTTACAAGACCTCCCTCTGAAAGATTTGAATATTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCTAACTTCAGACAAGCTGGAAACCCATTTAATATTAATGCTACTTCAATTCCTAGTCCTGCACCTGGCCCTCCAGTGACAGCACCAGTTTCTGGGGCACCACCAGGAACAGTGGTTTCTGGGGCACCATCAGGAACACCGGTTTCTGGGGCACCACCAGGAACAGTGGTTTCTGGGGCACCACCAGGAACAGTGGTTTCTGGGGCACCATCTTCTGGTCATGTACCCACTAAACAGGCTGATGGACCAACCGGAGCAAAGGAATCAAATTCTGGGAAATCGAAAAAAACCACCAAGAGGGTGGTTTGGATATCTATTGCTAGTGTATTGGGATCCGTTATTTTGATCCTAGGACTCATTCTCTTTATTCCAGGATGTATTAGAAGGGAACGTGATGACAGAAGGTCCAAACGACATCAAATTGGTGCATATGGAGGAGAAAGACAGAATGCTAGGGATTATGGTGCTTTAGTCCAAACACCTAGTCAAACTGAGAAAGTACCACCAGTAGAGGATGTTCTGAGGCCAAAAGAGAATCGTCAAGCAGAGACCAGGAAAGTGGGGGTTACTCCAAATCCACAGGATGAGCAAAAGAAGGATGTGCAAAGAATTGCAACAGTACCAAAGCCGAAAGATCATAGGATAGATATGAGTACACTAGAAGTATATTCAATGCCGCCTGCTCCACCCCCACCTCCTCCACCTCCACCCCCACCCCCACCTCCCCCTCCCCCTCCCCCTCCTCCACCCCCACCTCCTCCTCCTACTAAGAGGGTGATTGTTGAGCCAACCATGTTCCGCAAAGGGACTAATGCCAATCCATCTGTAAAAAGTTCAGTTCCTCCTTCCACTCTGGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGCTGGGCAGGGTGTATAGGGCAGAGCTTCCTAATGGGAAGCTGCTTGCTGTCAAGAAACTGGAAAAGAAAGCTTCTGATCACCAGAAGGATGATGAGTTTCTTGAATTGGTAAATGATATCGACAAAATGCGACATGTAAATATTGTTGAGCTTGTTGGATACTGTTCAGAGCATGGTGAGAGGCTTCTGATCTATCAGTACTGCAGTAACGGGTCACTGCATGATGCACTCCACTCAGATGAGGAATTCAAAACAAAACTCACGTGGAATACTCGCATTCTGATAGCTCTCGGTGCTGCTAAAGCCTTAGAATATTTGCATGAGAAATGTCAGCCACCTGTGGTACATAGAAATTTGAAGTCTGCCAATATTCTCCTTGACAAGGATCTATCCGCGCGTGTATCTGATTGTGGTTTAGCCTCATTAATAGTTTCGGGATCTGTAAGTCAGCTCTCGGGGCACCTGCTAACAACTTACGGCCATGGAGCTCCAGAAATGGAGTCAGGAATTTACACTCACCAAAGTGATGTTTACAGCTTTGGAGTAATTATGTTAGAACTTTTGACTGGTCGTCAGCCCCATGACAGGACACGTCCGCGAGGAGAACAATTCCTAGCCAGATGGGCAATTCCCCAACTTCATGATATTGATGCATTATCAAGCATGGTTGATCCTTCTTTAATTGGAGATTACCCTGCTAAATCATTGTCAAATTTTGCAGACATTATTTCTCGATGCCTTCAGTCTGACGCAGAATTTAGGCCAGCAATGTCAGAGGTGGTCCAATACTTACTAAATATGATAAGGAGGGAGTCTTAG 2478 0.4439 MGWKRSALEYKRVKIVGQVLLGFLLICTIQISSAVTDPSDVAAINSLYAAWGSPVLPGWVPSGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLATFVSISIIELSNNNIGGSIPSNLPVTLKNLFLSANQLTGSIPTSLSTLTGLTDMSLNNNLLTGEIPDAFQALPLLINLDLSNNSLSGKLPPSVENLSSLTTLRLQNNKLSGTLDVLQDLPLKDLNIENNQFAGPIPPKLLSIPNFRQAGNPFNINATSIPSPAPGPPVTAPVSGAPPGTVVSGAPSGTPVSGAPPGTVVSGAPPGTVVSGAPSSGHVPTKQADGPTGAKESNSGKSKKTTKRVVWISIASVLGSVILILGLILFIPGCIRRERDDRRSKRHQIGAYGGERQNARDYGALVQTPSQTEKVPPVEDVLRPKENRQAETRKVGVTPNPQDEQKKDVQRIATVPKPKDHRIDMSTLEVYSMPPAPPPPPPPPPPPPPPPPPPPPPPPPPPPTKRVIVEPTMFRKGTNANPSVKSSVPPSTLAKSFTIASLQQYTNSFSQENLIGGGMLGRVYRAELPNGKLLAVKKLEKKASDHQKDDEFLELVNDIDKMRHVNIVELVGYCSEHGERLLIYQYCSNGSLHDALHSDEEFKTKLTWNTRILIALGAAKALEYLHEKCQPPVVHRNLKSANILLDKDLSARVSDCGLASLIVSGSVSQLSGHLLTTYGHGAPEMESGIYTHQSDVYSFGVIMLELLTGRQPHDRTRPRGEQFLARWAIPQLHDIDALSSMVDPSLIGDYPAKSLSNFADIISRCLQSDAEFRPAMSEVVQYLLNMIRRES 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4921g00008 825 SUPERFAMILY L domain-like 36 244 - -
Gabi4921g00008 825 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 77 817 - -
Gabi4921g00008 825 SUPERFAMILY Protein kinase-like (PK-like) 518 817 IPR011009 -
Gabi4921g00008 825 MobiDBLite consensus disorder prediction 402 501 - -
Gabi4921g00008 825 Gene3D Transferase(Phosphotransferase) domain 1 621 825 - -
Gabi4921g00008 825 MobiDBLite consensus disorder prediction 466 501 - -
Gabi4921g00008 825 Pfam Protein tyrosine and serine/threonine kinase 546 817 IPR001245 GO:0004672|GO:0006468
Gabi4921g00008 825 Gene3D Phosphorylase Kinase; domain 1 507 620 - -
Gabi4921g00008 825 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 621 825 - -
Gabi4921g00008 825 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Gabi4921g00008 825 MobiDBLite consensus disorder prediction 434 460 - -
Gabi4921g00008 825 SUPERFAMILY Formin homology 2 domain (FH2 domain) 484 578 - -
Gabi4921g00008 825 MobiDBLite consensus disorder prediction 253 340 - -
Gabi4921g00008 825 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Gabi4921g00008 825 MobiDBLite consensus disorder prediction 412 426 - -
Gabi4921g00008 825 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 509 620 - -
Gabi4921g00008 825 ProSiteProfiles Protein kinase domain profile. 543 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4921g00008 825 MobiDBLite consensus disorder prediction 312 333 - -
Gabi4921g00008 825 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Gabi4921g00008 825 Gene3D Ribonuclease Inhibitor 36 262 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4921g00008 Gabi-Chr4921 58475 70554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4921g00008 31 824 Strubbelig Receptor Gene Family AT4G03390 57.908 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gabi4921g00008 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4921g00008 - - ahf:112737625 1061.98