Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4918g00010 ATGGAAAAGCTGAATTTTATTAAAAATGGGGTGAGCAGATTGCCTCCTGGATTTCGTTTCCAGCCAACAGATGGAGAGCTTGTCTTTCAGTACTTGAAATGTAAGATCTTCTCATTCCCCTTGCCTGCCTCTATCATTCCTGAGATCAATGTCTGCAACTACGATCCTTGGGATTTGCCAGGAAATTGTGACCAGCAAGAGAGGTACTTTTTCAGCTCCAAGGAAGCAAAGTATCGAAATGGCAATCGCATGAACCGAACAACAAACTGTGGCTATTGGAAAGCAACAGGAAAAGACAAAAAAATATCATCTTCAACGTGTAATGGTATTGTGGGGATAAGAAAAACATTGGTTTTTTATGAAGGGAAATCGCCAAATGGGTCTAGAACTCATTGGGTCTTGCACGAATATCGCCTAGTCAGTGTAGAAACTAGTGCTTGCAACTCAAACCAGAACCACGTAAACGAGATAGGAGATTGGGTTCTATGTCGCGTATTCATGAAGAAAAGAAGTATAGAAAGTGATGGCAGCACCACTCACATGCATAGGCAAAATACAGTTCGGGCTCCTCCAAGAATGTTTGATTTTATGATGGTAAGCAAGACCGATTCTTCTACATCTTCCTCATGTTCAAGTTCCAGTAACATCAGAGAGGTCTCTTCAAATGCATCAGACCATGAAGAAACAAGTGGTTATGCTGATTTATAA 708 0.4096 MEKLNFIKNGVSRLPPGFRFQPTDGELVFQYLKCKIFSFPLPASIIPEINVCNYDPWDLPGNCDQQERYFFSSKEAKYRNGNRMNRTTNCGYWKATGKDKKISSSTCNGIVGIRKTLVFYEGKSPNGSRTHWVLHEYRLVSVETSACNSNQNHVNEIGDWVLCRVFMKKRSIESDGSTTHMHRQNTVRAPPRMFDFMMVSKTDSSTSSSCSSSSNIREVSSNASDHEETSGYADL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4918g00010 235 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 209 - -
Gabi4918g00010 235 MobiDBLite consensus disorder prediction 204 220 - -
Gabi4918g00010 235 SUPERFAMILY NAC domain 10 168 IPR036093 GO:0003677|GO:0006355
Gabi4918g00010 235 MobiDBLite consensus disorder prediction 204 235 - -
Gabi4918g00010 235 Gene3D NAC domain 23 173 IPR036093 GO:0003677|GO:0006355
Gabi4918g00010 235 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
Gabi4918g00010 235 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Gabi4918g00010 235 MobiDBLite consensus disorder prediction 221 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4918g00010 Gabi-Chr4918 97933 99893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4918g00010 1 171 NAC Transcription Factor Family AT5G13180 62.573 2.62e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4918g00010 NAM 8.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4918g00010 - - gmx:100812015 389.037