Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00117 ATGGCTTTTGAAATCAGTTCTGTTGTTTCAAAATTGCAAATGGTATCCACTTCCGACCATTCCTCCGTAGTCTCCATGAACTTATTTGTGGCACTTCTATGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCTATCACTGCCCTTTTGATTGGTCTTTGCACTGGCGTAGTCATTTTGCTGTTTAGTGGTGGCACAAACTCGCATATTCTTGTTTTCAGTGAAGACCTTTTCTTTATATACCTTCTGCCGCCTATTATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAATTTTTTGTTAACTTCATTACAATCATGTTGTTTGGTGCTATTGGTACATTAATATCTTGTACCGTCATAACTTTGGGCGTTACGCAAGCTTTTAAGAGGATGGATATTGGTCCACTGGAGATTGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCGACAGATTCTGTTTGCACGTTGCAGGTGCTAAATCAGGATGAGACACCTTTGCTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACATCGGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAACCAAATTGATCCTACAATTGCTTTGCACTTCATTGGCAACTTCTTATATCTGTTTATCGCGAGTACCATGCTTGGGGTTTTGACAGGTCTTCTTAGTGCTTACATTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAAGTTGCTCTTATGATGCTAATGGCATACCTCTCCTACATGCTGGCTGAATTATGTTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTTATGTCGCATTATACTTGGCATAACGTGTCTGAGAGTTCAAGAATCACTACTAAGCATGCGTTTGCAACCTTGTCGTTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAGGTTTGTCAGTGATAGCCCTGGAACATCTGTAGCAACGAGTGCAGTATTGTTGGGTCTAGTACTTGCTGGAAGAGCAGCTTTTGTTTTCCCCTTATCCTTCTTATCCAATTTGACTAAAAAATCACCAAATGATAAAATCTCCTTCAGACAGCAAGTGATCATTTGGTGGGCTGGTCTCATGAGAGGTGCTGTTTCAATTGCACTCGCATATAATCAGTTCACCATGTCGGGACATACTCAACTGCGAAGCAATGCAATCATGATTACTAGCACCATCACTGTTGTGCTTTTCAGCACAATGGTGTTTGGTTTGATGACTAAGCCGCTCATAAGGCTTTTACTGCCTCAGGACCCTCATTCTAAAGGCACAAACAGCATGACAAGCACAGATCCCTCTACTCCAAAATCATTCAATGTCCCACTTCTAGGAAGTGCTCAGGATTCAGAAGCCGATCTTGATAGCAGAGTTCCTCGTCCAAGCAGCATTCGTGCCTTACTAAGCACTCCAACACACACTGTTCATCGTTTATGGCGTAAGTTTGATGACGCCTTCATGCGTCCCGTTTTTGGTGGCAGGGGCTTCGTTCCTGTAGAACCTGGCTCACCAAATGAACGCAATGGTCATCCATGGCGTTGA 1632 0.424 MAFEISSVVSKLQMVSTSDHSSVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVVILLFSGGTNSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIGTLISCTVITLGVTQAFKRMDIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDPTIALHFIGNFLYLFIASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVSESSRITTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVATSAVLLGLVLAGRAAFVFPLSFLSNLTKKSPNDKISFRQQVIIWWAGLMRGAVSIALAYNQFTMSGHTQLRSNAIMITSTITVVLFSTMVFGLMTKPLIRLLLPQDPHSKGTNSMTSTDPSTPKSFNVPLLGSAQDSEADLDSRVPRPSSIRALLSTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPNERNGHPWR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00117 543 Gene3D - 146 197 - -
Gabi4914g00117 543 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00117 543 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00117 543 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00117 543 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00117 543 PANTHER SODIUM/HYDROGEN EXCHANGER 16 521 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Gabi4914g00117 543 MobiDBLite consensus disorder prediction 452 472 - -
Gabi4914g00117 543 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi4914g00117 543 NCBIfam sodium/hydrogen exchanger 3 24 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00117 Gabi-Chr4914 1079749 1086124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00117 6 540 Antiporters AT3G05030 77.778 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00117 - - gmx:100816746 936.791