Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00096 ATGCCCAAAATGGCTTTGTTACAGTCACCCCTCCATTTTTCAAATTCATTTCTCAGCACAAGCACCATTGTCGCACTCTGCGTATTCTTTTCCCTCCTCTGTGCTTGCATCATCATTGGCCATCTTCTGGAAAAGAACCGGTGGGCCAATGAATCCATCACTGCCCTTCTTCTGGGGTTGTGTTCTGGAGTGGTGGTGTTGCTGGTGACCAAGTTCCATAGTACCAAGATTCTAATATTCAGTGAAGACTTGTTCTTCCTTTACTTGCTTCCACCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACGGTTCTTCAAGAATTTCACAACTATACTGCTGTTTGGAGTCCCTGGAACATTTATTTCATTCCTTCTCATATCTGCTTGTGCCTTTCTGCTCATTAGATGGATTGGCATTACTAACCTGGGCATAAAAGATTACCTAGCCATTGGTGCCATATTGTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTGCTTTACAGTATTGTATTTGGGGAGGGAGTAGTAAATGATGCTACGTCTATTGTGCTTTTCAATTCGGTCCAATCACTTGACTTCAGCAGCATCAATGCTATTACAGCCTTGAAATTGTTGGGGACCTTCCTTTACCTCTTCTGCACTAGTACCGCCCTTGGCATAGCAGTTGGCCTTTTAAGTGCTTACATTATTAAAACACTTTACTTTGGAAGGCACTCTACCGATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTGTCATATATGGTTGCTGAGCTTTTAAATCTCAGTGGGATTTTGACTATTTTCTTCTGCGGCATTGTTATGTCACACTACACATGGCACAACGTTACAGGAAGCTCAAGGACAACAACCAAGCACTCCTTTGCAACTATCTCATTCATTGCTGAAACCTTTATATTTCTATATGTTGGCATGGATGCTTTAGACATTGACAAATGGAAAATGAGCAAAGCCAGCGTAGGAACTTCAGTTGCTGTAAGTTCAACGTTGTTTGCGTTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAACCTTACCAATTGCATGCAGACAAGAGAGAGCACCAAACTTGAGCTTCGATCGCAGTTTATAATATGGTGGGCAGGCCTAATGAGAGGTGCAGTGACTATTGCCTTGTCTTATAACCAGTTTGCACGATCCGAGGTAACATCAGAGCGAGATTCAGCATTAATGATCACCTCTACTATAGTAGTTGTCTTATTCAGTACTGTGGTTTTTGGTTCTATAACAAAACCTCTGATCGAGGCTGTTCAGCTACGGCATTCAAAACCACCTATTTCTGATTCCACTGATAATCTAGAAGATTTGAGATCACTATTCCTTGAAAACAGTGGTCCTATTAACCAAGGCAACAACAATGAACCATGTCACAGGCGGAGTAGCCTACGTTTACTTATATCTCATCCAGCTACAACCGTTCACTACTTTTGGAGGAAATTTGATGACAAGTTTATGAGACCAGTATTTGGTGGAAGGGGTTTTGTTCCACCGGTTCCTGGTTCACCATCACCATCTGGTGAACCAGAGGATACTTCTTGA 1623 0.4196 MPKMALLQSPLHFSNSFLSTSTIVALCVFFSLLCACIIIGHLLEKNRWANESITALLLGLCSGVVVLLVTKFHSTKILIFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFTTILLFGVPGTFISFLLISACAFLLIRWIGITNLGIKDYLAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDATSIVLFNSVQSLDFSSINAITALKLLGTFLYLFCTSTALGIAVGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMVAELLNLSGILTIFFCGIVMSHYTWHNVTGSSRTTTKHSFATISFIAETFIFLYVGMDALDIDKWKMSKASVGTSVAVSSTLFALVLIGRAAFVFPIANLTNCMQTRESTKLELRSQFIIWWAGLMRGAVTIALSYNQFARSEVTSERDSALMITSTIVVVLFSTVVFGSITKPLIEAVQLRHSKPPISDSTDNLEDLRSLFLENSGPINQGNNNEPCHRRSSLRLLISHPATTVHYFWRKFDDKFMRPVFGGRGFVPPVPGSPSPSGEPEDTS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00096 540 NCBIfam sodium/hydrogen exchanger 3 26 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00096 540 Gene3D - 145 197 - -
Gabi4914g00096 540 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00096 540 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00096 540 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00096 540 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi4914g00096 540 PANTHER SODIUM/HYDROGEN EXCHANGER 26 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Gabi4914g00096 540 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00096 Gabi-Chr4914 936168 940213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00096 21 531 Antiporters AT3G05030 62.355 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00096 K14724 - qsa:O6P43_026859 783.867