Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00091 ATGAACACGCCACGTGGCTTCTACCAAAATGGCGGAATATTCGCCTTTTGTTTCTTCCTCCTCATCTTATCCCCACTCATCACCCTCGTGGGAGCACAATCCAACAACCCAAACGATCCTTATTACAACAACAACAACCTCAACTTCAGCCCCTCCTTAGCCATCATTATCGTCATACTCATCGCCGCTCTCTTCCTCATGGGCTTTTTCTCCATCTACATCCGCCACTGCGCTGATTCCCCCTCCGGCAACATACGCAACCTCGCCGGCGGAGCCGCCGGACGATCCCGGAGGGCGGCGCGTGGGCTCGATCCTGCCGTGATCGAGACGTTCCCAACCTTTGAATACTCCGCGGTGAAGATTCATAAGATTGGAAAGGGCGCGCTTGAATGCGCGGTGTGCTTGAACGAGTTCGAGGAGACCGAAACGCTGCGTTTGATCCCGAAATGTGACCATGTCTTCCACCCAGAGTGCATCGACGAGTGGCTCGCTTCGCACACCACCTGCCCCGTCTGCCGAGCCAACCTTGCCCCCACCGGCGACACCGTGCGTGGAATTCCTGTCCTCAACGCCGAGGGGGAAGATGTCGAGGCCCAGAACGACGTCGTCGAATCCGATCCCGAACAGCAAAATGCGGACGCTGTTCAAGACTCAAAAGAACTGGAAGTTATGCGCTTGAACCAGACGCTTAACCGAAACCGAACGAGAGGGTCGCGGTCGAGCCGGACGCGCCGGTTCCCGAGGTCTCACTCGACCGGCCATTCGGTTGTCCAACCGGCTGAAGACACGGAACGGTTCACTCTGAGATTGCCCGTGGAAGTGAGGAAGCAGATACTGAACCCGGAATTGCATCGGGCCAGAAGCTTGGTTATCTTGCCTCGACAAGGTAGTTCGCGGCGGGGATATCGAACCGGCGGAGAGGGAAGTAGCAGAGGGAGGTCTTCGAGGCGATTGGACCGGGGATTTAAATCGGACCGGTGGGTTTTCACGATGGCGCCGCCGTTCCTAGTCAGAGCTTCGTCGATTAGGTCCCCAAGGGTGGCTAATAGCGCCGGTGAAGGCACTTCCTCTAATACAGCTCCTCCGCCTCCGCCGGCTGTGGACTCGGCTCGCCCACCGGTTTAA 1125 0.5751 MNTPRGFYQNGGIFAFCFFLLILSPLITLVGAQSNNPNDPYYNNNNLNFSPSLAIIIVILIAALFLMGFFSIYIRHCADSPSGNIRNLAGGAAGRSRRAARGLDPAVIETFPTFEYSAVKIHKIGKGALECAVCLNEFEETETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLAPTGDTVRGIPVLNAEGEDVEAQNDVVESDPEQQNADAVQDSKELEVMRLNQTLNRNRTRGSRSSRTRRFPRSHSTGHSVVQPAEDTERFTLRLPVEVRKQILNPELHRARSLVILPRQGSSRRGYRTGGEGSSRGRSSRRLDRGFKSDRWVFTMAPPFLVRASSIRSPRVANSAGEGTSSNTAPPPPPAVDSARPPV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00091 374 SUPERFAMILY RING/U-box 125 178 - -
Gabi4914g00091 374 MobiDBLite consensus disorder prediction 343 357 - -
Gabi4914g00091 374 FunFam E3 ubiquitin-protein ligase ATL6 92 179 - -
Gabi4914g00091 374 MobiDBLite consensus disorder prediction 294 318 - -
Gabi4914g00091 374 Pfam Ring finger domain 130 173 IPR001841 -
Gabi4914g00091 374 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Gabi4914g00091 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 179 IPR013083 -
Gabi4914g00091 374 CDD RING-H2_EL5-like 130 173 - -
Gabi4914g00091 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 35 271 - -
Gabi4914g00091 374 MobiDBLite consensus disorder prediction 230 260 - -
Gabi4914g00091 374 MobiDBLite consensus disorder prediction 341 374 - -
Gabi4914g00091 374 MobiDBLite consensus disorder prediction 358 374 - -
Gabi4914g00091 374 SMART ring_2 131 172 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00091 Gabi-Chr4914 857575 859046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00091 12 374 Rapid Response to Elicitors AT3G05200 44.307 4.41e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00091 K10664 - gmx:100810865 424.861