Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00089 ATGGAAGTTAATACTACTACCTCAGTACCTTCAGGGCCACCCACTGCTTCTCCAAACAACCATACATACACACAGCACCACTTACATTCAGAAAATCATAACCATAGTCATGGCCATTTACCATCCAGAACCATTTTCATAACCATAGCTGCAGTCACCTTAGTCACTGTCCTATTTATCATTTTTCTGGTAGTATTCTTGATCCGTCGGAAAAAATCTTCAAGCAAGAATGGAACTTGCAAAGATGACAATAGAGTGCTTCATAACACAAGCAGCAAGCTCATGGATTCAACAACTTTGAACGTTAATTCTAGCCCAGATGTGAAGGGTGGGTGTCTTCATGGGGGAAATCTGAACATGACACCATCACCTAAGTTTCGAGGAGTACAAGTGTTCACGTATAGGGAACTAGAAGTTGCCACGGAAGGATTTAATGAAGCTAATGTGATTGGTAATGGAGGGTTTGGTTTGATGTATAGAGGAGTCCTGAGTGATGGCACTTTGTCAGCAATTAAGTTGCTGCACAGTGAAGGTAAGCACAGGGAGCGTGCCTTCAGAATAGAGGTCGATCTTCTAAGCCGCTTGCACTCTCCTTATTTAGTGGAATTGCTTGGCTATTGTGCTGACCAACATCACAGGTTATTGATATTTGAATACATGCCCAATGGTACACTCCAACAACATCTTCACTCCCCCAACAATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCCCTTGAGTTCCTACATGAACATGCAGTCTCACCTGTGATCCACCGAGACTTCAAGAGTAACAACGTTCTACTGGATCAAAATTTCCGTGCTAAGGTGTCAGATTTTGGATTGGCTAAGATGGGGTCAGAGAAGATGAACGGTCAGGTTTCCACCCGTGTGTTGGGGACCACTGGATACCTGGCACCAGAGTACGCCTCCACAGGCAAGCTTACTACAAAGTCAGATGTTTACAGCTATGGCGTGGTTCTTCTTGAACTGCTAACAGGAAGGGTCCCAGTTGATATTAAGCGGGCCCCTGGAGAACATGTCCTTGTCTCTTGGGCTCTTCCAAGGTTAACAAATAGAGAAAAGGTGGTGGAAATGGTTGACCCAGCTATACGCGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCATTAGTACCCCTTGTTAGGAACCCATCTTCTCTTAGTTCATCCAGTTCACTTAGATTTCTGAAACAAACACCGAGTCCAAGTCATTAG 1335 0.4479 MEVNTTTSVPSGPPTASPNNHTYTQHHLHSENHNHSHGHLPSRTIFITIAAVTLVTVLFIIFLVVFLIRRKKSSSKNGTCKDDNRVLHNTSSKLMDSTTLNVNSSPDVKGGCLHGGNLNMTPSPKFRGVQVFTYRELEVATEGFNEANVIGNGGFGLMYRGVLSDGTLSAIKLLHSEGKHRERAFRIEVDLLSRLHSPYLVELLGYCADQHHRLLIFEYMPNGTLQQHLHSPNNQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKMNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVVEMVDPAIRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSLSSSSSLRFLKQTPSPSH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00089 444 ProSiteProfiles Protein kinase domain profile. 144 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4914g00089 444 Gene3D Phosphorylase Kinase; domain 1 117 219 - -
Gabi4914g00089 444 SUPERFAMILY Protein kinase-like (PK-like) 124 417 IPR011009 -
Gabi4914g00089 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Gabi4914g00089 444 CDD STKc_IRAK 150 420 - -
Gabi4914g00089 444 PANTHER OS01G0750732 PROTEIN 11 429 - -
Gabi4914g00089 444 MobiDBLite consensus disorder prediction 424 444 - -
Gabi4914g00089 444 MobiDBLite consensus disorder prediction 1 37 - -
Gabi4914g00089 444 Pfam Protein tyrosine and serine/threonine kinase 148 417 IPR001245 GO:0004672|GO:0006468
Gabi4914g00089 444 FunFam Serine/threonine-protein kinase PBS1 113 219 - -
Gabi4914g00089 444 Gene3D Transferase(Phosphotransferase) domain 1 220 432 - -
Gabi4914g00089 444 FunFam Receptor-like serine/threonine-protein kinase ALE2 220 434 - -
Gabi4914g00089 444 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00089 Gabi-Chr4914 837513 840536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00089 112 441 Receptor kinase-like Gene Family AT3G58690 62.798 2.24e-153 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gabi4914g00089 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00089 - - gmx:100499645 699.123