Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00075 ATGGCTGATACTGTGTTGGAACTAAACCTTGGTTTAGGGCAGTCTCCAAGGCCACGATGCCCCGCACCGTTTCTTTTGAAAACTTACGATTTGTTGGAAGAAAGTGAGGTGAATGGTGAAGCTGAAGATCATAGCACCAAAATAGTGTCATGGAATGCAGAAGGAAATGGTTTTGTTGTGTGGTCTCCTGCTGAATTCTCAGAGCTCACCTTGCCAAGATTTTTCAAGCACAACAACTTCTCTAGCTTCATTCGCCAATTGAATACATATGGATTTAAGAAAATATCATCTAAGAGATGGGAATTCAAGCATGAGAAATTTCAGAGGGGCTGCAAGCATATGCTAGTTGAAATCACGAGGAAAAAGTGCGAGCCAAGTGTCTTTCCTTCATACCTCAAGTCTTCTTCAGAGGAAAATGCAGTGACTTCCATGGAAGAAAATAATCATCAACTACTTATGGAGGAGAACATGAACCTAAAGAAGGAGAGATTGGAGCTGCAAATGCAGATAGCCGAATGCAAAGCATTGGAAATGAAATTGTTGGAGTGTCTCTCTCAATTTATGGATAACCACCAAAATAAAGTTAGGAGACTCTGTTAA 600 0.4067 MADTVLELNLGLGQSPRPRCPAPFLLKTYDLLEESEVNGEAEDHSTKIVSWNAEGNGFVVWSPAEFSELTLPRFFKHNNFSSFIRQLNTYGFKKISSKRWEFKHEKFQRGCKHMLVEITRKKCEPSVFPSYLKSSSEENAVTSMEENNHQLLMEENMNLKKERLELQMQIAECKALEMKLLECLSQFMDNHQNKVRRLC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00075 199 FunFam Heat stress transcription factor A-6b 17 122 - -
Gabi4914g00075 199 SUPERFAMILY "Winged helix" DNA-binding domain 21 121 IPR036390 -
Gabi4914g00075 199 Coils Coil 149 179 - -
Gabi4914g00075 199 Gene3D - 18 122 IPR036388 -
Gabi4914g00075 199 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 176 IPR027725 -
Gabi4914g00075 199 SMART hsfneu3 20 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gabi4914g00075 199 Pfam HSF-type DNA-binding 24 121 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gabi4914g00075 199 ProSitePatterns HSF-type DNA-binding domain signature. 71 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00075 Gabi-Chr4914 724255 726444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00075 20 188 HSF AT5G62020 34.826 2.36e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gabi4914g00075 HSF_DNA-bind 3.6e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00075 K09419 - gmx:100789792 335.109