Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00027 ATGGGTTTGAGTTCTAAGCAGGTTTCAAGTAGTGGACTTGATTGGAAACAAACCTTATTGGAAGCTCAAAACTTGGAGCTACCAAAGCCTCATCTGATGAGGAAACAACAGCAACAAACTCAGCAATCAGAGTCTTTGAACTGCCCAAGATGTGACTCTACAAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTTTACGCAATGTTCCCGTTGGTGGTGGCAGGAAGAATAAGAGGGTAAAAAAATCAACCACCCCAACATCTTCCTCCACCAACAAAGCCACCACCTCCTCTACTTGCACCACCACTGTCTCCACCTCAATTGGCAACATGGGTGGTGGGTCAAGTAGCCACATGACAATGAATCAAACTCCTCTTGCAGTGAGTAATCAGAAAAGCATGCCTTCCTCTTTCTATCAAGTTCAAGCTTTGATTCGTCCACCATCTTTGCTGCTACAACAGAATCTGATGAATACTGGAGACTTAGAAAGCAAAGATTTTGGTATTGGTAATAGCATCTTTCTGAGTTCAACTTTGCCTCTTCCTCAAAACCAAAGCCTACTCTTTCCCTTCTCAACCTCAAGCTCTTTTGACACAAACCCTTGTGCAGTATCAACTTCTCTGCGATCCTCCAATGTTTATAACTATGGGGAGGAGTTTAAAACAATGGAGGAACCAACCATCAACAGCATAATGCCCAGCACAAGTGGGAGTAACACACAGCCATGGGAGATACCAGCAGCAACAAGTGCTGGCATGGAAACTTCAAACTATTGGAATTGGGAGGACATTGATTCTTTGGTCTCAACTGATCTGAAAGATCCCTGGGATGATTCTGATATCAAACCATGA 912 0.4364 MGLSSKQVSSSGLDWKQTLLEAQNLELPKPHLMRKQQQQTQQSESLNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPTSSSTNKATTSSTCTTTVSTSIGNMGGGSSSHMTMNQTPLAVSNQKSMPSSFYQVQALIRPPSLLLQQNLMNTGDLESKDFGIGNSIFLSSTLPLPQNQSLLFPFSTSSSFDTNPCAVSTSLRSSNVYNYGEEFKTMEEPTINSIMPSTSGSNTQPWEIPAATSAGMETSNYWNWEDIDSLVSTDLKDPWDDSDIKP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00027 303 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Gabi4914g00027 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 35 212 IPR045174 GO:0003700|GO:0006355
Gabi4914g00027 303 MobiDBLite consensus disorder prediction 84 125 - -
Gabi4914g00027 303 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Gabi4914g00027 303 MobiDBLite consensus disorder prediction 103 125 - -
Gabi4914g00027 303 Pfam Dof domain, zinc finger 45 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00027 Gabi-Chr4914 376124 377771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00027 33 117 C2C2-Dof Transcription Factor Family AT5G60850 64.368 4.99e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi4914g00027 zf-Dof 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00027 - - gmx:100818111 406.371