Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00013 ATGGCAGAGGAAATGGCAAGTGAGATATTGAACTCTCTTGTAACTCAGAGGCCGCATTCAGCAGAAGCAAATCGAAACATCAGAGTGGAAGTTAACCCATCTGTTACCCTCAAGTTTGAAGATGTTGTGCACAGAACCAAAATTAGCATAGGGCAAAGCTTATTCTGCAAAAAGGAGGCAAGTTCTGAAGAGAAACTGGTCTTAAAAGGGATTAGTGGTGCTGTTTTTCCAGGTGAATTATTAGCCATTTTAGGCCCTTCTGGTAGTGGTAAAACAACTCTGATAAATGTTTTGGGAGGCCGGCTCAATGGTACCATTAGAGGAAACATAACCTACAATGGCAAACCCCTTTCAAAACCAGTGAAGCAAAACATGGGATTTGTTGCTCAGCACGATGTCTTCTATCCTCATCTATCAGTCAGTGAGACACTTGTCTATTCTGCTCTTCTTCGCTTGCCAAATAGCCTCTCTAAGGAAGAGAAAATCTCAAATGCTGAGGCAGTTATGAATGAACTTGACCTGACTCATTGTAAGGACACTATAATGGGAGGGCCACTCCTAAGAGGCGTTTCAGGTGCAGAACGGAAGAGAGTTAGCATTGGGCAAGAACTGTTAACAAATCCAAGTCTCTTGCTTGTTGATGAGCCCACTTCAGGTCTTGACTCAACCGCAGCTAGACGAATTGTGCTAACTCTGTGTGAGTTAGCTAAAGGTGGAAGGACTATCATAATGACTATCCACCAGCCTTCCAGCAAACTTTATTACATGTTTGAAAAGATTTTACTGTTATCAGAAGGTAGTAGCCTGTACTTTGGGAAGGGAGAAAATGCTATGAACTACTTCTCTAGTATCGGATATGCTCCATCTTTAGCCATGAATCCTTCAGATTTTCTGCTCGATCTTGCAAACGGTATATATTCTGGAAATTCAGAAAATGATACAAAAGCAACAAAACAAGCGTTATTAGCTGCTTTTGAGAGTAACCTTGCATGCCAAGTGAAGATGGAACTTCAAAATGACAGGGTTTCATTACATGAAAGTTCGGAAGCAGAGATATTTGGTCAATATTGCACAACCTGGTGGCAACAGTTTAACATATTACTAAGAAGGGGTTTCAAAGAAAGAAAACATGAGCAATTTTCAGTCCACAAAATCTGTCAGGTTTTGGCCTTATCATTTTTCGCAGGTCTTCTCTGGTGGCAGTCTAGAATTGATGAAATGCATGACCTGGTAGCATTACTTTTTTACTATACACAAGTGTGGGGATTCTTCCCTATGGTCCAGTCCATCTTTACTTTTCCTAGTGATCGAGGAATGATAATAAAGGAAAGGTCTTCCTACATGTATAGACTCTCATCTTACTTCATAGCAAGTAATGTTGTTGACCTTCCAGTACAGCTAGCCTTACCATCATTTTTTGTCACCATTACTTATTGGATGGGAGGGCTAAAAGCCAATGCTTCAAACTTCTTCCAAACTCTAGCTGTTGTTCTTCTCTATGCTTTGATATCACAGAGTGTTTGGCTTGCTATTGGTGCACTGCTTGTAAATAATCAAAGGGTGGCTGCTTCAGTTGGATCAGTGGTCATGACATTATCTGTTCTAGTCAATGGCTACTTTGTTCAAAATATGCCAGCATCTATATCCTGGTTAAAGCGCATATCTCATAGCTATTATTCCTATAAACTCTTGCTGGGGTCACAGTTCAAGTATGATGACACTTACCGGTGTGGTTCAAATTTCACTTGCTTAGTTGGGAACTATCCTGTAATTAAGCATGTAGGCCTTGACAAGCAAGGTTTCTCTGTTGCTGCCTTGGTGGCAATGCTTGTAGGCTACAGACTTTTTGCCTATTTTGCCCTTATGATTGGTATGAAACAAAATTAG 1887 0.4065 MAEEMASEILNSLVTQRPHSAEANRNIRVEVNPSVTLKFEDVVHRTKISIGQSLFCKKEASSEEKLVLKGISGAVFPGELLAILGPSGSGKTTLINVLGGRLNGTIRGNITYNGKPLSKPVKQNMGFVAQHDVFYPHLSVSETLVYSALLRLPNSLSKEEKISNAEAVMNELDLTHCKDTIMGGPLLRGVSGAERKRVSIGQELLTNPSLLLVDEPTSGLDSTAARRIVLTLCELAKGGRTIIMTIHQPSSKLYYMFEKILLLSEGSSLYFGKGENAMNYFSSIGYAPSLAMNPSDFLLDLANGIYSGNSENDTKATKQALLAAFESNLACQVKMELQNDRVSLHESSEAEIFGQYCTTWWQQFNILLRRGFKERKHEQFSVHKICQVLALSFFAGLLWWQSRIDEMHDLVALLFYYTQVWGFFPMVQSIFTFPSDRGMIIKERSSYMYRLSSYFIASNVVDLPVQLALPSFFVTITYWMGGLKANASNFFQTLAVVLLYALISQSVWLAIGALLVNNQRVAASVGSVVMTLSVLVNGYFVQNMPASISWLKRISHSYYSYKLLLGSQFKYDDTYRCGSNFTCLVGNYPVIKHVGLDKQGFSVAALVAMLVGYRLFAYFALMIGMKQN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00013 628 Pfam ABC-2 type transporter 362 569 IPR013525 GO:0016020|GO:0140359
Gabi4914g00013 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 284 IPR027417 -
Gabi4914g00013 628 Gene3D - 56 284 IPR027417 -
Gabi4914g00013 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 290 IPR003439 GO:0005524
Gabi4914g00013 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 616 - -
Gabi4914g00013 628 FunFam ABC transporter G family member 22 55 284 - -
Gabi4914g00013 628 Pfam ABC-2 type transporter 247 344 IPR043926 GO:0140359
Gabi4914g00013 628 Pfam ABC transporter 68 218 IPR003439 GO:0005524
Gabi4914g00013 628 SMART AAA_5 77 275 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00013 Gabi-Chr4914 154863 157698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00013 74 278 Calmodulin-binding Proteins AT2G36910 27.273 6.59e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00013 K05681 - gmx:100800295 950.658