Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00012 ATGGACAGCATAGATTCATCATCATGCTCTCAGCATCCCCATCTCCCTCCAGGGTTTCGATTCCACCCCACGGATGAGGAACTCGTCGTTCACTACCTCAAGAGAAAAGCTGCATCTGCACCTCTTCCTGTTGCCATCATCGCCGAAGTTGATCTCTACAAGTTCGACCCTTGGGAACTCCCAAGTAAAGCAACGTTTGGTGAGCAAGAATGGTACTTTTTTAGCCCAAGAGATCGAAAATACCCAAATGGGGCAAGGCCAAACAGGGCTGCTACTTCTGGGTATTGGAAAGCCACTGGAACTGACAAGCCTATACTAACGTCTGATGGGCACCACAAAGTTGGTGTCAAAAAAGCACTTGTTTTTTATGGTGGGAAGCCTCCAAAAGGGGTTAAAACCAATTGGATTATGCATGAGTATAGGCTTATTCATAATTCCTTTGATTCTTGCTCTAAACCTCCTCCTCTGGCTGCTGATCCTCCACACAATAACAAGAAGAATTCCCTAAGGCTTGACGATTGGGTTTTGTGTCGAATATACAAGAAAAGCAATAGTACCACCCTGCCAAGGCCACCCATGATGGAGCTAGATAACGAGCTTTCAATGGAAACCATGGTACCAACCATGTCAACTTATTCAATGGCTAATACACACCAAAACTCTAAACCTCCATCTTCTAGAAGCACAAGTTATGGAACGCTAGGACATGAAAATGATGACAACTTCTTCGGTGGAATCTTAGCAACTGATCATCATCAGAGCATGCAAAACGGTTCTGATTCTCACCTAGTAGTCTCTCCAAACTCAAAAGGTGCTAATAATACCAATAATTTCCCCACGAAACGTGCACTAACATCACAGTTTTGGAACGAGACTGGGTCTACAGGGTCATCTTCTTCAAACAAGAGATTCCATGGTGATCTTAATAGTGGAAGCGCTGAAGAAAACAATTCCTTTGTTTCCCTGCTTAGCCAGCTTCCTCAGAGCACATCGTTGCATCCAAATGCGATTCTTGGGTCTGTTGGGGATGGTGTACTCAGACAACAATTTCAACTTCCCGGCATAAATTGGAACTAA 1077 0.442 MDSIDSSSCSQHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLIHNSFDSCSKPPPLAADPPHNNKKNSLRLDDWVLCRIYKKSNSTTLPRPPMMELDNELSMETMVPTMSTYSMANTHQNSKPPSSRSTSYGTLGHENDDNFFGGILATDHHQSMQNGSDSHLVVSPNSKGANNTNNFPTKRALTSQFWNETGSTGSSSSNKRFHGDLNSGSAEENNSFVSLLSQLPQSTSLHPNAILGSVGDGVLRQQFQLPGINWN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00012 358 PANTHER NAC TRANSCRIPTION FACTOR 56 15 209 - -
Gabi4914g00012 358 MobiDBLite consensus disorder prediction 214 235 - -
Gabi4914g00012 358 MobiDBLite consensus disorder prediction 1 20 - -
Gabi4914g00012 358 SUPERFAMILY NAC domain 10 182 IPR036093 GO:0003677|GO:0006355
Gabi4914g00012 358 ProSiteProfiles NAC domain profile. 15 182 IPR003441 GO:0003677|GO:0006355
Gabi4914g00012 358 Gene3D NAC domain 24 187 IPR036093 GO:0003677|GO:0006355
Gabi4914g00012 358 FunFam NAC transcription factor 56 24 187 - -
Gabi4914g00012 358 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Gabi4914g00012 358 MobiDBLite consensus disorder prediction 290 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00012 Gabi-Chr4914 135457 136771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00012 5 358 NAC Transcription Factor Family AT1G61110 54.098 7.13e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4914g00012 NAM 7.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4914g00012 - - gmx:100797132 554.288