Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4914g00003 ATGGATTATATTTTATTAAAGTTGATGAGTTTATACACCTTGGTTCTTCTACTTTTTCTACCTCTTAAGCCTGTTGTTTCTTCTAGACATAGGCAATATTGGAGTGGTAAGAGGAAATTGATCTCTGGCTATAATGGTGATCTTGTGACCAACTTGACTGGCCAGCCTCATGTTGATTTCCAACACTATGCTGGGTATGTCACGGTCAACGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTATGAGGCTATGACTAAGCCAGAAGAGAAACCATTGGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGTCATGGCCTTAAATTTAATAACTTCTCATGGAACAGAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCAAATACAACTAGTGACTATGATCAATTGGGAGATGACTTGACAGCTAATGATGCTTACTCTTTTCTTCACAATTGGTTCATCAAGTTTCCATCCTATAGAACGAGGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTTCCAGAGCTGGCTGAACTCATCCATGACAGGAACAAGGACCCTTCCCTTCATATTAATCTCAAGGGTTTTTTGCTGGGTAACCCTGAAACATCTGATGCTGAGGACTGGATAGGTCTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCACCAAACAATCAGAAAAAGTTGTGACTTTAACAGCAGTGATCCATGGGGTAATAAAGATTGTAGTGAAGCTGTGGATGAAGTACTCAAACAGTACAACGAAATTGACATCTATAGCCTCTACACTTCTGTTTGCTTTGCCACCACAGCACGTTCAAACGGTCAATCGATGCAAACTTCGATGAAGCGTTCATCTAAAATGATGCCTAGAATGATGGGTGGATATGATCCATGCTTGGATGACTATGCTAAAGCTTTTTATAATAGACCAGATGTTCAGAGGGCCCTCCATGCCAGCGATGGTCACAATCTAAAGAATTGGAGTATTTGCAACAACAAGATATTCAATGATTGGGCAGATTCAAAGCCATCAGTTATCCCAATTTACAAGAAGCTTATTTCAGCAGGACTTAGAATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTACCAGTGCTGTCCACAAGGTACAGCTTAAGTTCTCTAGCTTTGCCTGTCACTAAGCCATGGAGGCCTTGGTACCATGAAAATGAGGTTAGCGGGTGGTTTGAAGAATATCAGGGGCTTACATTTGCAACATTTAGAGGAGCTGGTCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCGCCTCTTTTCTCGATGGAGAATCACCACGTTCTACAAAATAA 1446 0.4191 MDYILLKLMSLYTLVLLLFLPLKPVVSSRHRQYWSGKRKLISGYNGDLVTNLTGQPHVDFQHYAGYVTVNETNGRALFYWFYEAMTKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGHGLKFNNFSWNREANMLFLESPVGVGFSYSNTTSDYDQLGDDLTANDAYSFLHNWFIKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHINLKGFLLGNPETSDAEDWIGLVDYAWSHAVISDETHQTIRKSCDFNSSDPWGNKDCSEAVDEVLKQYNEIDIYSLYTSVCFATTARSNGQSMQTSMKRSSKMMPRMMGGYDPCLDDYAKAFYNRPDVQRALHASDGHNLKNWSICNNKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKPWRPWYHENEVSGWFEEYQGLTFATFRGAGHAVPCFKPSNSLAFFASFLDGESPRSTK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4914g00003 481 ProSitePatterns Serine carboxypeptidases, serine active site. 192 199 IPR018202 GO:0004185
Gabi4914g00003 481 Pfam Serine carboxypeptidase 57 474 IPR001563 GO:0004185|GO:0006508
Gabi4914g00003 481 Gene3D - 333 369 - -
Gabi4914g00003 481 Gene3D - 380 474 - -
Gabi4914g00003 481 FunFam Carboxypeptidase 380 474 - -
Gabi4914g00003 481 FunFam Carboxypeptidase 44 302 - -
Gabi4914g00003 481 FunFam Carboxypeptidase 330 476 - -
Gabi4914g00003 481 Gene3D alpha/beta hydrolase 44 302 IPR029058 -
Gabi4914g00003 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Gabi4914g00003 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Gabi4914g00003 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 141 IPR001563 GO:0004185|GO:0006508
Gabi4914g00003 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Gabi4914g00003 481 SUPERFAMILY alpha/beta-Hydrolases 47 475 IPR029058 -
Gabi4914g00003 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 461 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4914g00003 Gabi-Chr4914 34104 37904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4914g00003 338 475 Calmodulin-binding Proteins AT2G22960 34.532 5.44e-17 77.4