Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4913g00007 ATGGATCAGTTGGCGGGAATAATCTGGGATGCTACTATTCGTTTGTTCGGTTTTGCAACAACACATGCTGCCTACATTTATAAGCTGACGGAGAATATGGAGTCATTAATATCCAAATCTAATACTCTTCGAAGTATCCACGACGATGTGAATAGAGAATTTATTGAGGCTGAGAGCACTGGAGAGAGGCGTAGGACAGCTACAGTGGATGATTGGTTGCAGAAAGTTCAAAACCTTCAAGAGGTTATTGAGGGTATTAAAATTTCTCCTGAAGTTCAAAAAAAATGTTTAAGTGGTCCAAGCTACAAGTTAGGGAAAAAAGTTGTTGAGAAACTCTCCGAAGTGGATGAACTGTTAAAGTTGGGAATACCTTTTAAGAATGTTATTACTTACAAGCTAGAGCCTAAGCGGGTGTATATTAGGCCTTCTAAGGAGATAGTAGGCTTGGATTCAATGTTCAACCAAGTTTGGAATAGTATTGAAGATGAAAATATGGGTATCATTGGTTTATATGGCATGGGTGGGGTAGGAAAAACCACCCTTCTAGGGAGAATTCACAATGAATTTGGAAATAGGCATTGTGACTTTGTTATATTGCGGGTAGTGGTTTCTAGAGATTGTGACATCAATACAATTGTTAATGAAATTGGAAACATGTTACGTATCAAAGATGGTGATTGGAATGAAATTAGCACAGAACAAAGAGCGGGAAAGATATATCAAAAACTATGTCAAAAGAAATATGTCTTGTTGTTAGATGATCTATGGGAAAAATTGGAACTAGAAAAAGTGGGAGTTCCATATCCAAATGAAAAGTCAAAAGTGTTATTCACAACACGGTTAGAGGATGTGTGCTCTAAAATGCAAGCTCAAAAGAAATTTAAAGTGGAATGTTTATCAGAGCAAGATGCATTTGATTTGTTTTGCAGAAAAGTAGGTGATGAAACTTTAAGGAGGCACACAAAAATTGAAGAACTAGCATGGGAGATAGTTAAAAAATGTGGAGGATTGCCACTAGCACTTACTATAATAGGAAATGCCATGGCTGGAAAAAAAAGCGTTCAAACATGGAGTCAAGAAAAAAAAGATTTTACGAGTTATAGTTCCAAAGCTTCAGATTCGAAGAAAAAACTGTTTCATATTCTCAAGTCTAGCTATGATAGATTGCCAGATGAAACACACAAAAACTGTTTTCTATATTGTGCACTATACCCTGAAGATTATGAAGTCAAAGTTGATGGTATAATTAATCAATGGATTGGAGAGGGTTTTCTTGGTAAAGATAAGGCATGGAAGAGTATATATGATTTGTATGAGCAAGGAGAATCAATCATTGAAGAATTGAAGCTTTCATGTCTATTAGATGGTGTTGAATATGAATTTGAGTGGAGCTCTGTGATTAAGATGCATAGTGTGGTCCGAGATATGGCACTCTGGTTAGCCTGTGATGAAGATGCAAACAAACACAAAATTGTAGTTGATAGGGAAGCATTGGCGACATCAGATATGGATTATGAAAAGTTGAATGTTGTGGAGAGGATTTCAATTAGAGGAGGTAGTGGAAGCTGGCAAGTACCGACTTGTCCAAATCTCTTGACCCTATATGTACAATCTAATATGAACACTGATTTTTCAAATCTGCATTCGATGACAAGATTGAAAGTCTTGGATGTATCAGATAATGCCTATATTAAAGATCTCCCCATAGGGGTACTTGGAGAGCCGGCTCGCCTCAAAGATATAGATAAGTTCGGTATACGTAAAAAACAAGATCTCCCCAAGGAAATAAGCAAGTTAATTAACTTGGAATTCCTTAATCTATCAGGAACAAGAATAGAAGGGTTACCAATTGAATTGAAGAATTTGAAAAGCTTGAGGATATTGCTTATGGAAGATATTGATATTAAAATCATTCCTTTGGAAGTGATTGAAAGTCTTAAGCAATTAAAGGTGTTTAGACTTTCTACAAGGATTGAAGGAGGAAGTGAGGAGGAGAAAGCACTTCTAGAGAAGTTGGAGTCTTTACCAAAATTGGAGGAATTATGCATCCAACTAAAAACCATCACTGGCATGTATAAATTGCTTGGGTCAACCAAATTGAGGGAATGCTCCAGACGTTTATGGCTTGATGGAATCAAAGACACAATTGAAATGACACCATTATTAGCATCTTTGTCAAGTATGGAACATCTGGACCGTATAACATTATCCTTTGTAAATAACATTGTGGAAGGTTCATCCATTACTTGCCATCTTTCCAAGCTTCGTGGGGTGAATATTGATTGTTGTCATTCAATAACTCATTTAACATGGCTAAGGTATGCTCCGTATGTTGAGTCTCTTTCAGTTTCTAGATGTCATTCAATTGAAGAAGTAGTGAAGGAAGCCAAAGATGAAGGTGAAATATTCTCAAATCTTAGACGTCTTGAACTTTCTAATTTGCCAAAACTGAAGATCACCTGCATGGGAAAATTGCCAAACCTTCTGCGAGTGAATATTGATCGTTGTCATTCAATAACTGATTTGACATGGTTGAGGTATGCTCCGCTTCTTGAGTCTCTTTCAGTTTCAAACTGTTGCTCAATTGAAGAAGTGGTGAAGGAGGGTGGCCAGGACAGAGACAAAGCCAATTATGTATTCTCGAATCTCATATGGCTCTCCCTTCAATATTTGCAAAAGCTTGAGAGCATCCACCAGAGTGCATTGGCTTTTCCTTCACTGAAATTTGTTGACATTAAGGGTTGCCCAAATTTGAGGAAGCATCCTTTGAATTCCAACTATGCCATCGCCAAGGACAAATCCAAGGAGAATACAAGTGGTGGAACAATTTAG 2832 0.3718 MDQLAGIIWDATIRLFGFATTHAAYIYKLTENMESLISKSNTLRSIHDDVNREFIEAESTGERRRTATVDDWLQKVQNLQEVIEGIKISPEVQKKCLSGPSYKLGKKVVEKLSEVDELLKLGIPFKNVITYKLEPKRVYIRPSKEIVGLDSMFNQVWNSIEDENMGIIGLYGMGGVGKTTLLGRIHNEFGNRHCDFVILRVVVSRDCDINTIVNEIGNMLRIKDGDWNEISTEQRAGKIYQKLCQKKYVLLLDDLWEKLELEKVGVPYPNEKSKVLFTTRLEDVCSKMQAQKKFKVECLSEQDAFDLFCRKVGDETLRRHTKIEELAWEIVKKCGGLPLALTIIGNAMAGKKSVQTWSQEKKDFTSYSSKASDSKKKLFHILKSSYDRLPDETHKNCFLYCALYPEDYEVKVDGIINQWIGEGFLGKDKAWKSIYDLYEQGESIIEELKLSCLLDGVEYEFEWSSVIKMHSVVRDMALWLACDEDANKHKIVVDREALATSDMDYEKLNVVERISIRGGSGSWQVPTCPNLLTLYVQSNMNTDFSNLHSMTRLKVLDVSDNAYIKDLPIGVLGEPARLKDIDKFGIRKKQDLPKEISKLINLEFLNLSGTRIEGLPIELKNLKSLRILLMEDIDIKIIPLEVIESLKQLKVFRLSTRIEGGSEEEKALLEKLESLPKLEELCIQLKTITGMYKLLGSTKLRECSRRLWLDGIKDTIEMTPLLASLSSMEHLDRITLSFVNNIVEGSSITCHLSKLRGVNIDCCHSITHLTWLRYAPYVESLSVSRCHSIEEVVKEAKDEGEIFSNLRRLELSNLPKLKITCMGKLPNLLRVNIDRCHSITDLTWLRYAPLLESLSVSNCCSIEEVVKEGGQDRDKANYVFSNLIWLSLQYLQKLESIHQSALAFPSLKFVDIKGCPNLRKHPLNSNYAIAKDKSKENTSGGTI 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4913g00007 943 FunFam Probable disease resistance protein At1g63360 386 479 - -
Gabi4913g00007 943 FunFam Probable disease resistance protein At5g66910 298 385 - -
Gabi4913g00007 943 Gene3D - 299 385 IPR042197 -
Gabi4913g00007 943 FunFam Probable disease resistance protein At1g61300 130 293 - -
Gabi4913g00007 943 Pfam NB-ARC domain 151 387 IPR002182 GO:0043531
Gabi4913g00007 943 PRINTS Disease resistance protein signature 334 348 - -
Gabi4913g00007 943 PRINTS Disease resistance protein signature 167 182 - -
Gabi4913g00007 943 PRINTS Disease resistance protein signature 548 564 - -
Gabi4913g00007 943 PRINTS Disease resistance protein signature 242 256 - -
Gabi4913g00007 943 Gene3D - 386 478 IPR036388 -
Gabi4913g00007 943 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 920 - -
Gabi4913g00007 943 Gene3D Ribonuclease Inhibitor 803 936 IPR032675 -
Gabi4913g00007 943 Gene3D Ribonuclease Inhibitor 666 798 IPR032675 -
Gabi4913g00007 943 Gene3D Ribonuclease Inhibitor 493 665 IPR032675 -
Gabi4913g00007 943 SUPERFAMILY L domain-like 468 922 - -
Gabi4913g00007 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 401 IPR027417 -
Gabi4913g00007 943 Gene3D - 126 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4913g00007 Gabi-Chr4913 84846 93710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4913g00007 145 425 WRKY Transcription Factor Family AT5G45050 24.055 3.33e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4913g00007 - K13459 adu:107480591 721.465