Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi490g00005 ATGGCAATCGAAAACCAAGACACCCCTGTCCGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGATGAGGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGTAACATGTATTGCTTGGACTGTATGAACGGCCCTCTCTGCTCTCTCTGCCTCGCTTACCACAAGGATCATCGTGCCATCCAGATTAGGAGATCCTCGTACCATGATGTGATCAGGGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGCGTCCAAACCTACATTATCAACAGCGCCAAGGTGGTGTTCTTGAACGAGAGGCCTCAGCCAAGGCCTGGAAAAGGTGTCACAAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTCGATTCTTACCGGTTCTGTTCTCTGGGTTGCAAGATTAAAGGAACATCTAAGAATTTCCAGAAGAAGAAGCAGCCAGCTACAATGGCATCGGACTCGGAGGATTCATACAGCAGCAGCAGCAGCAGCCATGGCCGGCAGAAGAACAGCAAAGTGCAGAGCTTCACACCATCTACACCACCCCCAACTTCAGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCGCACCGAGCCCCAATGGGGGGACTAATCATAGAATACTAG 711 0.4951 MAIENQDTPVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSAKVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIKGTSKNFQKKKQPATMASDSEDSYSSSSSSHGRQKNSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi490g00005 236 CDD Bbox2 49 88 - -
Gabi490g00005 236 MobiDBLite consensus disorder prediction 169 213 - -
Gabi490g00005 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
Gabi490g00005 236 MobiDBLite consensus disorder prediction 9 28 - -
Gabi490g00005 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 229 - -
Gabi490g00005 236 MobiDBLite consensus disorder prediction 169 236 - -
Gabi490g00005 236 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi490g00005 Gabi-Chr490 59881 62250 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi490g00005 PLATZ 7.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi490g00005 - - gmx:100797900 426.402