Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4907g00005 ATGAGAATTATAGTCTTTGGTTTCAGGCCTCGTACAAAACAGAGACGTGTTATATTTAATGCACTGCTGAAGTGTACAAAGCCAACCAGACTCTGGGATCTTTATGCTTTTACATCTGGACCTTCTAGGTTTAAGAACACTACTCCACTGGTGCGCTTGTTGGATGAGTATTTTCGACTTCTTTGCAAAGGTTCTTATCGTGCATCAATCAATATGATTGAAAGCGGGTCCTTCACCTTGTCAAATGACTTATGGAGAATAAGTAATGTGAATTCCAATTATACAATGTGCCAGAGTTATCCATTTGCTTTGCTTGTTCCAAATATCATCAGCGATGACGAAGTGCTCCAGGCTTGTAGCTTCCGTGCAAGATGTCGATTGCCTGTAGTTTCATGGTGTCATCCTGGTACCGGAGCAGTTCTTGCACGTTCTTCCCAACCCTTAGTTGGTCTCATGATGAATATGAGGAGCAACATGGATGAAAAACTCGTGGCTGCACTTTGCAGCAAACTTGATGATGGCTCAAGGAGAAAGCTATATATTGCTGATGCGAGGCCAAGGAAAAATGCATTAGCTAATGGAGCCATGGGAGGTGGTTCGGAATCATCATCGAACTATTTTCAATCTGAGATAGTTTTTTTTGGGATTGAAAACATCCATGCAATGAGAGACAGCTTTGCTCTGCTCCGAGAATACATGGACACTCACGGCAGAGCATCATCAGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCGACATGGGGTGGTGGCAATTTAAGTAGTATGTCTGCTTCGGTATCAACCCTTGGGGACAGTGGATGGTTACTGCATGTTCAAAGTGTCTTGGCTGGTGCAGCTTGGATTGCTGCTCGAGTTGCGATAGAAAAAGCTTCTGTTCTTGTACATTGCAGTGATGGATGGGACAGGACAAGCCAGTTGGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCACAGGGTTTCAGGCTCTTGTTGAAAAAGATTGGCTAGCATTTGGTCATCCATTTTCCGAACGTCTGGGAACGCCATCTGTCTCTGGAAGTGGCAACATGCCTTTCGAGTTATCTAGGCAGTCTTCGACTGGCAATATCCCATCATCATCCATGCGCCAGTCATCTGGAGCATTCCCATCTCAACCTCCGGCTTCATCTCATGCACATTCTTCAAACAACTGCTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAATTGTTGCGGATGTATCCTTTTGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGATGGCGTGCTTTCTTGTCGTTTTGGAAACTTCTTATGTAATAGTGAGAAGGAGAGGAAGCAATGCAATGTTTTTGAAGCTTGTGGATGTTTGTGGGTATACTTGGCTGATTTGAGGACATCAGGAGTTTCCCATGTGCATTATAATCCCTTTTTTGATCCGCTGAAGCACAATGGTCCTCTTCTGCCCCCAGCAGCAGCGTTAGCCCCAATTTTATGGCCCCAATTCCACCTTCGTTGGGCATGCCCTGAAGAAGCACAAGCTGGGGAGATTGAAGCGCAATGTAGGAAGATTATTATGAAATTCTCTGAGATGCAGAAGGCTAAAGAAGCTGCAGAACGGAAAGCTAAAGAAATTACAAATGCCATGGAATCATTGAACGCTGAATTACGACATGAGAAGCTGCAAAACAGCTCAGCTATGAACATTGCCAAGAGGACAAGCAAAGAAAATATGGCCATAAAGCGCGCAATTCAGTCAATTGGGTGCAAGGTTCAGTTCTCTGGTAGTGGTGATTGCACGGTTGACATTGAAAGCAACCCAGTGGAAGCACCACAAAACTTTTCGTATTGTTCCCCGATGAAAGAATCAGATTGTACTGTGCGTGATGACAAAAAGGATCTATCTGTTTCAATAACAGTTACAGCAGATGATGATCATGGAAACAATGGCATTCGTCGAGTATGTGAAACTCTCTGCCCTTTTCGCTCTGCAGATGGAGGCTGCAGGTGGCCAAATGGTGGTTGTGCTCAACTAGGTAGCCAATTTGTTGGTCTGAAGGCAAATTTTGATGCATTTGACCAATTATCAATTGACGATAGTTATTTCAAGTCTGAGTAA 2148 0.4372 MRIIVFGFRPRTKQRRVIFNALLKCTKPTRLWDLYAFTSGPSRFKNTTPLVRLLDEYFRLLCKGSYRASINMIESGSFTLSNDLWRISNVNSNYTMCQSYPFALLVPNIISDDEVLQACSFRARCRLPVVSWCHPGTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCSKLDDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIENIHAMRDSFALLREYMDTHGRASSDGMSSFLRHGGSTWGGGNLSSMSASVSTLGDSGWLLHVQSVLAGAAWIAARVAIEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALVEKDWLAFGHPFSERLGTPSVSGSGNMPFELSRQSSTGNIPSSSMRQSSGAFPSQPPASSHAHSSNNCSPIFLQWVDCVSQLLRMYPFAFEFSAAFLVDFLDGVLSCRFGNFLCNSEKERKQCNVFEACGCLWVYLADLRTSGVSHVHYNPFFDPLKHNGPLLPPAAALAPILWPQFHLRWACPEEAQAGEIEAQCRKIIMKFSEMQKAKEAAERKAKEITNAMESLNAELRHEKLQNSSAMNIAKRTSKENMAIKRAIQSIGCKVQFSGSGDCTVDIESNPVEAPQNFSYCSPMKESDCTVRDDKKDLSVSITVTADDDHGNNGIRRVCETLCPFRSADGGCRWPNGGCAQLGSQFVGLKANFDAFDQLSIDDSYFKSE 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4907g00005 715 ProSiteProfiles Myotubularin phosphatase domain. 65 513 IPR010569 -
Gabi4907g00005 715 PANTHER MYOTUBULARIN-RELATED 1 619 IPR030564 -
Gabi4907g00005 715 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 76 517 IPR029021 -
Gabi4907g00005 715 Pfam Myotubularin-like phosphatase domain 35 456 IPR010569 -
Gabi4907g00005 715 ProSitePatterns Tyrosine specific protein phosphatases active site. 302 312 IPR016130 GO:0016311|GO:0016791
Gabi4907g00005 715 MobiDBLite consensus disorder prediction 368 400 - -
Gabi4907g00005 715 CDD PTP-MTM-like 125 416 - -
Gabi4907g00005 715 Coils Coil 538 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4907g00005 Gabi-Chr4907 42339 66157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4907g00005 1 713 Protein tyrosine phosphatase (PTP) family AT3G10550 67.877 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4907g00005 K18081 - gmx:100781842 1208.74