Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4906g00013 ATGGGTTTTTTGTTGAAAGAAGCTTTGAAGACTCTATGCGGTAGAGATCAGTGGTCTTATGCTGTTTTCTGGAAGATCGGTTGCCAAAATTCCAAGCTATTAATCTGGGAAGAATGCTATTATGAACCCGTGCCATGCCCTTTTCCTCCCCGCAATTTTGGGACATCTAATTTGCCTTACCAGAATGGGGAAGGATGCTGGTTTTCTTCAGAGATTCAAAAGGAGGACAGAGTCTGTTCTCTGATTAACAAAATGACAGTAAATAATTCAGTCATTGTTGCAGGTGAAGGTATAATTGGACGGGCTGCATTTACTGGCAGCCACCAGTGGATTTTGAACAATTTCACTAACGATGCATGTACACCAGAGGTATCTGCTGAAGTGCATCACCAATTTTCAGCTGGAATGCAGACAGTAATAGTTATTCCTGTGCTTCCTCATGGAGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAGAATATGGGATTTGTAAATGATGTGAAGAGCTTGATCTTGCAATTGGGATGTGTCCCTGGTGCCCTTCTATCTGAAGACTATTCAGCAAAACTTTCTACCGAAAGACTTGCTGGACCTGCTACTACTGCTGTGACTGTGTCTATTGATCCACCAGTCCTTACCTCGAATCGCACTCCCTCAGTAACTGATGGCTCCAATCAGCAAAGTAATTCATCTCATCCTTCAAGGCCTATTGTTGAAACACCTTGTCCTCAAAGGGGAGAAATGAATACTTACCAGGGTTTTGCATTGACACCCCAAACCCATAACCTGAACCAGATATCCAATAATCTTTGCCAACCAAAGGTTATTCCAATGAGTAAAACAAGCTTTGCTGACCAGCGAGAGAATAGAGCTTTGGAGGCTGAAGTGATACCTTCAAATCTTGATTCATGCCTGCAACAGCATTCTGTTTCATATAATGCAAGATCTGCATTCAATAACTTATCTGGTTTTGGACATTATGGCCAATCAAGTCTAAAATATATGGATCAACAAATCATATCTTCCATTGGGAGCCAAGATCAAATTAACCCTACTAGTATAAATTCGTCAAACATGTCTCAACTAAAAACAGATGCGGGCCATATACTTGGCCACAATCTGAGTTCTGGCAGTACTTCATTTCTTGGAGGAATCCCAATACATGGCGGGATGAGTAGTCTTTTGAGGACAAATCCACTTACTAGTTCTAGTTCAAAATCTCCCAAAGTATCCACAGCTGATTTATCTGGAGTACGAGAAGTTGGGATTAGATTTCAAAATAATGATTCAACTAAAGCGGGGGATTATTCTCTGGCTAATTTGACTAGTCAATCAGGTGCCTTTCCCATGTCTCTAGAAGGTTCTGATCAGAAGATTCTCCCTGTAGATTTCAAGTGTGCTTTAACAGATCAAAAGATAGACTACAGTTTTCTTCAGGCGCCTAACTTCCCCACTTTTCATGTTGAGGAGCATGTGCCTATTAGTCGTGAAATCCCTGGTTTTTTCCCAGATTGCCTTCATAAAGATGGTACCAGTCAATCTATTATAACAATGAATCTTAAACACAAGCAAGCTTGTGCTCAACCTCCATCAGGTGATGACGACCTGTTCGATGTTCTAGGTGTGGATTTTAAACACAAACTGATGAATGGAAACTGGAATAACCTGCTTGCTGATGACTCAGATGCTAATGCAGAAAATATGGATAAAAAGGCAACAGATATGAATGTTCAGGATACAAATCCTAATTGTTATTCTGTTAATGAAGCAATATCAGACAGTGGCATCTTCTCTGGGATGGGAACAGACCACCTCTTGGATGCTGTGGTCTCAAAGGCCAAATCTATTGCGAAACAGAATTCTGATGACGTGTCTTGCAGGACAACATTGACAAGGAATAGTACCTCCTCTGTTCCCTCTACTACCTGCAGGCAGGTTATGTCTGGTCGTTTCCAAGGGGGATTGTTTGATTTTCCTAAGAATGATTGTAAAACAGGTGCTGTAGACACTAGTTCTCTTAGGTCTGCATGTAGCAAGGATGATGCTGGAAACAGTTCTCAAACTACTTCTATATATGGGTCTCAACTTAGTTCATGGGTTGAGAATGGTGCTAATGTTAAGCGTGAAAATAGTGTTTCAACCGGATACTCAAAGCGGCCGGATGAAGCTTGCAAATCAATTCGTAAAAGGCTCAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTACGAGAAATCGTTCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAACGCACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTCAAACAGACTGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGACTGCTTTTGAAAGACAACTTTGAGGGAGGGGCTACTTGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATTATAGTTGAGGATCTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAAGAGCGAGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGGGTAATGGAAGCCCACAATGATAAAATCTGGGCACAGTTTACGGTTGAGGCAAACAGGGATGTAACCAGGATGGAAATATTCATGTCACTTGTTCAACTTTTGGAGCAAACAGTGAAGGGTAGTGCATCTTCATCCAATGCAATTGATGACATGATGGTTTATAACTCTTACCCACAGGCTCCCCAGATACCAGCATCTGGAAGGCCTAGTAGTTTGCAATGA 2835 0.4169 MGFLLKEALKTLCGRDQWSYAVFWKIGCQNSKLLIWEECYYEPVPCPFPPRNFGTSNLPYQNGEGCWFSSEIQKEDRVCSLINKMTVNNSVIVAGEGIIGRAAFTGSHQWILNNFTNDACTPEVSAEVHHQFSAGMQTVIVIPVLPHGVVQLGSFLPIMENMGFVNDVKSLILQLGCVPGALLSEDYSAKLSTERLAGPATTAVTVSIDPPVLTSNRTPSVTDGSNQQSNSSHPSRPIVETPCPQRGEMNTYQGFALTPQTHNLNQISNNLCQPKVIPMSKTSFADQRENRALEAEVIPSNLDSCLQQHSVSYNARSAFNNLSGFGHYGQSSLKYMDQQIISSIGSQDQINPTSINSSNMSQLKTDAGHILGHNLSSGSTSFLGGIPIHGGMSSLLRTNPLTSSSSKSPKVSTADLSGVREVGIRFQNNDSTKAGDYSLANLTSQSGAFPMSLEGSDQKILPVDFKCALTDQKIDYSFLQAPNFPTFHVEEHVPISREIPGFFPDCLHKDGTSQSIITMNLKHKQACAQPPSGDDDLFDVLGVDFKHKLMNGNWNNLLADDSDANAENMDKKATDMNVQDTNPNCYSVNEAISDSGIFSGMGTDHLLDAVVSKAKSIAKQNSDDVSCRTTLTRNSTSSVPSTTCRQVMSGRFQGGLFDFPKNDCKTGAVDTSSLRSACSKDDAGNSSQTTSIYGSQLSSWVENGANVKRENSVSTGYSKRPDEACKSIRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHNDKIWAQFTVEANRDVTRMEIFMSLVQLLEQTVKGSASSSNAIDDMMVYNSYPQAPQIPASGRPSSLQ 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4906g00013 944 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 732 781 IPR011598 GO:0046983
Gabi4906g00013 944 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 938 IPR043561 GO:0003700|GO:0006355
Gabi4906g00013 944 MobiDBLite consensus disorder prediction 208 245 - -
Gabi4906g00013 944 MobiDBLite consensus disorder prediction 722 746 - -
Gabi4906g00013 944 MobiDBLite consensus disorder prediction 208 238 - -
Gabi4906g00013 944 MobiDBLite consensus disorder prediction 710 746 - -
Gabi4906g00013 944 CDD bHLH_AtLHW_like 736 805 - -
Gabi4906g00013 944 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 171 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4906g00013 Gabi-Chr4906 108503 116633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4906g00013 533 929 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.102 1.08e-118 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4906g00013 - - gmx:100787748 1409.05