Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4903g00007 ATGGAGTATGGAAGGTTGGGACCCACCGACCCGGGTGGCTCCACGCGCTCCGACGCACCTCTTACCAATCCGCCAAGATCCTCCGGCGAGAAGAAGATCATCTTCCTCTCACTCCTCGCCGTCGTTCTCATCGTCGCCTCCGCCGTTTTAGTAACCACCGTCCGCTCCCGCCTTTCCGGCGAGGATAAAAACGGGCCTCACTCACGCGCGAAGCCCACACAGGCAATCTCTCGCACGTGCAGCAAAACTCAGTTCCCAACTCTATGCGTGAACTCACTCCTCGATTTCCCAGGTTCCACGGCGGCGTCGGAGAAGGACCTCGTCCACATTTCCTTCAACATCACCCTCCAGCGACTCACCAAGTCTCTCTACTCCTCCGCCGCCATCTCCGCCACCATGAACTCTCTCGTCCGCGCCGCCTTCGAAGACTGCCTCGAGCTCCTCGACGACTCCATTGACGCCCTCGCACGCTCCCTCACCTCCCTCGGTTCCTCCTCCTCCTCCTCCGACGTGGTGACGTGGCTCAGCGCCGCCCTAACTAACCAGGACACTTGCGCGGAGGGGTTCGCCGACACGAGCGGCGCCGTCAAAGATCAAATGGCCAACAACCTCAAGGACTTGTCGGAGCTGGTGAGTAATTGTCTCGCGATATTCTCTGCCTCCGGCGCCGGCGACGACTTCTCGGGTGTCCCCATACACAATAAGAGACGATTAATGGCAATGCGAAACGATAATTTCCCGAGATGGTTGAATAGACGAGATAGGAGATTGTTGAGCTTGCCCGTGTCGGAGATACAAGCCGATATTATAGTGTCGAAGAGTGGCAATGGAACGGTTAAGACTATCTCCGAAGCCATTAAGAAGGTTCCGGAGTACGGTGGCCGGCGCTTCATTATCTACGTCAGGGAAGGAAGGTACGAAGAGGAGAAGTTAAAGGTGGGGAGGAAGAAAACCAATGTGATGTTCATAGGGGACGGGAAGGGTAAGACGGTCATCACGGGCGGTAAAAATGTTAAGGAGGGCTTGACCACATTTCACAGCGCATCCTTCGCTGCTAGTGGTGCTGGTTTCATAGCAAGAGACATGACGTTCGAGAACTACGCCGGGCCGGGAAAGCACCAAGCGGTGGCCCTCCGTGTCGGAGCGGACCATGCGGTGGTGTACCGCTGCAACATCATCGGTTACCAGGACACAATGTATGTGCACTCAAACCGTCAATTCTTCCGGGAATGTGACATTTACGGTACGGTGGACATGATATTCGGCAACGCCGCCGTTGTTTTCCAAAACTGCAGTCTCTATGCTCGCAAGCCCATGCCCCAACAGAAGAACACCATCACGGCCCAAAACAGAAAGGATCCGAATCAGAACACGGGTATTTCCATCCACAATTGTCGGATCCTGCCCACCCCGGATCTGGAAGCATCCAAAGGTAGCTTCCCAACCTATCTGGGTCGTCCATGGAAACTATACTCTAGAACTGTGTACATGTTATCATACATGGGGGATCACATTCATCCACGTGGATGGCTGGAATGGAATGCAACCTTTGCTTTAGACACATTGTATTATGGTGAATACATGAATTATGGGCCGGGTGCAGCCGTTGGCCAACGGGTCAAGTGGCCCGGGTATCGGGTCATCACGTCCACCGATGAAGCAAGCAGATTCACGGTGGGCCAATTCATAATGGGCTCGTCGTGGTTGCCCCCCACCGGAGTTGCATTCGAAGCTGGATTATCCACCTGA 1749 0.5483 MEYGRLGPTDPGGSTRSDAPLTNPPRSSGEKKIIFLSLLAVVLIVASAVLVTTVRSRLSGEDKNGPHSRAKPTQAISRTCSKTQFPTLCVNSLLDFPGSTAASEKDLVHISFNITLQRLTKSLYSSAAISATMNSLVRAAFEDCLELLDDSIDALARSLTSLGSSSSSSDVVTWLSAALTNQDTCAEGFADTSGAVKDQMANNLKDLSELVSNCLAIFSASGAGDDFSGVPIHNKRRLMAMRNDNFPRWLNRRDRRLLSLPVSEIQADIIVSKSGNGTVKTISEAIKKVPEYGGRRFIIYVREGRYEEEKLKVGRKKTNVMFIGDGKGKTVITGGKNVKEGLTTFHSASFAASGAGFIARDMTFENYAGPGKHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFFRECDIYGTVDMIFGNAAVVFQNCSLYARKPMPQQKNTITAQNRKDPNQNTGISIHNCRILPTPDLEASKGSFPTYLGRPWKLYSRTVYMLSYMGDHIHPRGWLEWNATFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTDEASRFTVGQFIMGSSWLPPTGVAFEAGLST 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4903g00007 582 Gene3D - 262 580 IPR012334 -
Gabi4903g00007 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 219 IPR035513 -
Gabi4903g00007 582 MobiDBLite consensus disorder prediction 1 27 - -
Gabi4903g00007 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 220 IPR035513 -
Gabi4903g00007 582 FunFam Pectinesterase 262 580 - -
Gabi4903g00007 582 NCBIfam pectinesterase inhibitor domain 47 218 IPR006501 GO:0004857
Gabi4903g00007 582 SUPERFAMILY Pectin lyase-like 265 578 IPR011050 -
Gabi4903g00007 582 Pfam Pectinesterase 268 565 IPR000070 GO:0030599|GO:0042545
Gabi4903g00007 582 Pfam Plant invertase/pectin methylesterase inhibitor 75 217 IPR006501 GO:0004857
Gabi4903g00007 582 PANTHER PECTINESTERASE 43 570 - -
Gabi4903g00007 582 SMART PMEI_2 71 217 IPR006501 GO:0004857
Gabi4903g00007 582 CDD PMEI-like_3 80 220 - -
Gabi4903g00007 582 FunFam Pectinesterase 72 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4903g00007 Gabi-Chr4903 110198 113731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4903g00007 1 581 Carbohydrate Esterase AT5G53370 65.313 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4903g00007 - - gmx:100808236 906.746