Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4903g00003 ATGTCAGAGTATGATTTGGCAGCAGAGGGAGATTTGTTCAAAGCACCTGAACCTATTATTGAAGAGCCAGTCGTGGACGTGGATCCCATGACAGCAGCCATCTCGATGATATCTTGTGGGGAAGATGTCTCATCACAGGGACTAAAATCCACAGATATTGATATTCTTCAAAATGAACAGCTTCTGAGCGAGGTATTCTATGAGTGCAAAAAGGATCTCTTAGAAAAGGCGGCAATAGAGTCACCACTCTCTGAGATTCTGGATATCAAGGTTCCTGTTCTGAACATAGATGAGAACTCAATTCAAGAAAACAAGCCACTTCCTGACATGCCAAAGAGCATCAGTTCGGGAAGTTTAAGCTCAATGGACTGGATGCATGGAGCTGCAATGAATCCTGCTTTCCTTGATATCCCGGGAATAGATTTCAATGCAGTTTATGGCATGCGTAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATTGTCCAATCTCCCCATGAGAGGCCCTTTCCTATCTGCAACTGCACCAGTGAAGAACGCCAAGAAAAGCTCTCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACTGAAGAATCTGATGCTAAGAGGCAATGA 711 0.4304 MSEYDLAAEGDLFKAPEPIIEEPVVDVDPMTAAISMISCGEDVSSQGLKSTDIDILQNEQLLSEVFYECKKDLLEKAAIESPLSEILDIKVPVLNIDENSIQENKPLPDMPKSISSGSLSSMDWMHGAAMNPAFLDIPGIDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFPICNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDAKRQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4903g00003 236 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 115 229 IPR045281 GO:0009909
Gabi4903g00003 236 Pfam CCT motif 186 228 IPR010402 GO:0005515
Gabi4903g00003 236 ProSiteProfiles CCT domain profile. 186 228 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4903g00003 Gabi-Chr4903 16492 22007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4903g00003 173 232 C2C2-CO-like Transcription Factor Family AT5G24930 45.000 2.78e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi4903g00003 CCT 1.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4903g00003 - - gmx:100814332 408.683