Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4903g00002 ATGTATGCAGAGACTGGTCTTCTCTTCCCTTATTCGCACAGCTTCTCTCAAGAGCTTCATCAACTTGAAGAGTACTGCGAAACCCAGAAGTTCAATGTTTCAATGAGTGACCTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATTTGTTCAAAGCACCTGAACCTATTATTGAAGAGCCAGTCGTGGACGTGGATCCCATGACAGCAGCCATCTCGATGATATCTTGTGGGGAAGATGTCTCATCACAGGGACTAAAATCCACAGATATTGATATTCTTCAAAATGAACAGCTTCTGAGCGAGGTATTCTATGAGTGCAAAAAGGATCTCTTAGAAAAGGCGGCAATAGAGTCACCACTCTCTGAGATTCTGGATATCAAGGTTCCTGTTCTGAACATAGATGAGAACTCAATTCAAGAAAACAAGCCACTTCCTGACATGCCAAAGAGCATCAGTTCGGGAAGTTTAAGCTCAATGGACTGGATGCATGGAGCTGCAATGAATCCTGCTTTCCTTGATATCCCGGGAATAGATTTCAATGCAGTTTATGGCATGCGTAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATTGTCCAATCTCCCCATGAGAGGCCCTTTCCTATCTGCAACTGCACCAGTGAAGAACGCCAAGAAAAGCTCTCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACTGAAGAATCTGATGCTAAGAGGCAATGA 840 0.4321 MYAETGLLFPYSHSFSQELHQLEEYCETQKFNVSMSDLVQSSAMSEYDLAAEGDLFKAPEPIIEEPVVDVDPMTAAISMISCGEDVSSQGLKSTDIDILQNEQLLSEVFYECKKDLLEKAAIESPLSEILDIKVPVLNIDENSIQENKPLPDMPKSISSGSLSSMDWMHGAAMNPAFLDIPGIDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFPICNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDAKRQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4903g00002 279 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
Gabi4903g00002 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 158 272 IPR045281 GO:0009909
Gabi4903g00002 279 Pfam CCT motif 229 271 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4903g00002 Gabi-Chr4903 16492 22147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4903g00002 216 275 C2C2-CO-like Transcription Factor Family AT5G24930 45.000 3.92e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi4903g00002 CCT 1.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4903g00002 - - gmx:100814332 472.241