Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4896g00002 ATGAAGCTCCACTACTTTTCCTTGTTCATTCTTTTGGTCATCTTGGAGGTGAGAACCATTTATGGTCTCTCTACACAAGAAAATGTGCTAAAGAAATCATTGAAGTCCTTACCCCCTGAAGCCTTGTTGTCCATTAGTTACTATCAGAAAACATGCCCTGATGCTGAAGGCATTATCTCACAAAAGGTTGCTGCTTGGGTTAAGATGGACCCCACCTTGGCCCCTTCCATCATCCGCCTGCATTTTCATGATTGTGCCATTAGAGGATGTGATGGATCAATTTTGCTTAACCATACAGGGAGTGAAAGGAAAGCTTTTGAGAGCAGAACCCTAAGAGGTTTCCAATTGATTGATGATATAAAAGCTGAGCTAGAGAGGAGATGTCCAAGAACAGTTTCTTGTGCTGACATTCTCACTGCTGCTGCAAGAGATGCAACCATTTTAGCTGGAGGACCCTTTTGGGAAGTCCCATTTGGCAGAAAAGATGGAAAGATTTCCTTAGCCACAGAAGCCATGTTGGTTCCACATGGCCATGAAAACATTACAACTCTTATTGAATTTTTTCAAGAAAGAGGGCTAAACATGCTTGATTTGGTTACTCTCTCAGGTTCACACACAATTGGTAGGAGCACTTGCTATTCTTTTATGGACAGGCTTTACAACTTCAATGGGACTGGAAAACCTGATCCCTCACTCAACATCTTTTACTTGAACTTGTTGAGGAAAAGATGTAAAGGTGTGTTGGATTTGGTGTACCTTGATGTTATAACCCCAAGGACTTTTGACACAACCTATTACACAAACCTTATGAGGAAAGTTGGGTTGCTGTCAACAGATCAATCACTGTTTTCAGATGCAAGGACTTCTCCATTTGTTGAAGCATTTGCAACACAACCTTTCCTTTTTACTAGTCAGTTTGCAGTGTCAATGGTGAACCTTGGGAATGTTCAAGTTCTGACTAGGCCTAATGAAGGTGAAATCAGAGTGAACTGCAATTATGTCAATTCTGTGTAA 1014 0.4112 MKLHYFSLFILLVILEVRTIYGLSTQENVLKKSLKSLPPEALLSISYYQKTCPDAEGIISQKVAAWVKMDPTLAPSIIRLHFHDCAIRGCDGSILLNHTGSERKAFESRTLRGFQLIDDIKAELERRCPRTVSCADILTAAARDATILAGGPFWEVPFGRKDGKISLATEAMLVPHGHENITTLIEFFQERGLNMLDLVTLSGSHTIGRSTCYSFMDRLYNFNGTGKPDPSLNIFYLNLLRKRCKGVLDLVYLDVITPRTFDTTYYTNLMRKVGLLSTDQSLFSDARTSPFVEAFATQPFLFTSQFAVSMVNLGNVQVLTRPNEGEIRVNCNYVNSV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4896g00002 337 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 FunFam Peroxidase 46 186 - -
Gabi4896g00002 337 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 FunFam Peroxidase 175 313 - -
Gabi4896g00002 337 Pfam Peroxidase 60 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 SUPERFAMILY Heme-dependent peroxidases 43 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Gabi4896g00002 337 Gene3D Peroxidase, domain 2 175 313 - -
Gabi4896g00002 337 Gene3D - 46 335 - -
Gabi4896g00002 337 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Gabi4896g00002 337 CDD secretory_peroxidase 43 334 IPR033905 GO:0004601|GO:0042744
Gabi4896g00002 337 PANTHER PEROXIDASE 25-RELATED 15 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4896g00002 337 ProSiteProfiles Plant heme peroxidase family profile. 42 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4896g00002 Gabi-Chr4896 22898 24679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4896g00002 35 336 Peroxidase AT1G30870 51.475 4.76e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4896g00002 K00430 - gmx:100792775 578.17