Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00149 ATGCTTCAGGCATTGATGAATCTGATCCCTCTGTGTTTGAAGCCATTTGGGCGCGGTGCTGATAAATTCGATTCAATTGGAATTATTGGGAGCAGTTTTGGTGGAAGAGAAGGCAAAGACGGCTTGCTCTGGTTCCGCGACGTCGGAAAATATGGCTCCGGTGATTTCTCGATGGCGGTGGTCCAGGCAAACCAGGTTCTCGAAGACCAGAGCCAGATCGAATCTGGTCCTCTCGGCACCTTCGTCGGTATATACGATGGTCACGGAGGACCCGACGCAGCGAGATACGTATGCGATCACTTGTTTCACCATTTTCAAGCAATATCGGCTGAGTCACACGGAATTTTGACAACTGAGACTATTGAAAGGGCATTCCGTCAAACAGAAGAGGGGTACACTGCCCTCGTGTCAGACTTATGGAGTACTCGACCTCAGATTGCAAGTGCTGGGTCCTGTTGTCTAGTTGGACTGATATTTCAGCAGACACTATTTGTGGCCAACCTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACTGGAGGTATTGCTGCAATTCAGCTGTCTACAGAACACAACGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCTAATGATCCCCAAATTGTTGTCTTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTTTATATGAAAAAGGCGCAGTTTAATCGGGAACCACTTAATCCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCATGTCTGCAAATCCCACTATTATTTCTCATTCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCATCTGAGTAATGAAAAGGCTGTGGATATTGTCAACAGCAATCCACGTGCGGGTATTGCCAAGAGACTTATCAAGGCTGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTCCGTAATATTGACAAGAAGGTTCGACGCCATTTTCACGATGATATATCTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCGCAGCCCTAGACCCGCCCCTTTCACTTCGAAGCGCTCTCGATCACTGA 1140 0.4553 MLQALMNLIPLCLKPFGRGADKFDSIGIIGSSFGGREGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARYVCDHLFHHFQAISAESHGILTTETIERAFRQTEEGYTALVSDLWSTRPQIASAGSCCLVGLIFQQTLFVANLGDSRVVLGKKVGNTGGIAAIQLSTEHNANLEAVRQELKELHPNDPQIVVFKHGVWRVKGIIQVSRSIGDVYMKKAQFNREPLNPKFRLPEPMNMPIMSANPTIISHSLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPRAGIAKRLIKAALHEAARKREMRYSDLRNIDKKVRRHFHDDISVIVLFLNHDLISRGAALDPPLSLRSALDH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00149 379 ProSiteProfiles PPM-type phosphatase domain profile. 55 356 IPR001932 -
Gabi4891g00149 379 FunFam Probable protein phosphatase 2C 42 46 364 - -
Gabi4891g00149 379 Pfam Protein phosphatase 2C 79 324 IPR001932 -
Gabi4891g00149 379 PANTHER PROTEIN PHOSPHATASE 53 354 IPR015655 GO:0004722|GO:0006470
Gabi4891g00149 379 Gene3D - 47 364 IPR036457 -
Gabi4891g00149 379 CDD PP2Cc 56 356 IPR001932 -
Gabi4891g00149 379 SMART PP2C_4 42 354 IPR001932 -
Gabi4891g00149 379 SUPERFAMILY PP2C-like 65 357 IPR036457 -
Gabi4891g00149 379 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00149 Gabi-Chr4891 1210956 1215493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4891g00149 1 376 PP2C-type Phosphatase Gene Family AT4G38520 57.662 2.84e-161 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00149 K01102 - gmx:100790813 663.685