Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00148 ATGCTTCAGGCATTGATGAATCTGATCCCTCTGTGTTTGAAGCCATTTGGGCGCGGTGCTGATAAATTCGATTCAATTGGAATTATTGGGAGCAGTTTTGGTGGAAGAGAAGGCAAAGACGGCTTGCTCTGGTTCCGCGACGTCGGAAAATATGGCTCCGGTGATTTCTCGATGGCGGTGGTCCAGGCAAACCAGGTTCTCGAAGACCAGAGCCAGATCGAATCTGGTCCTCTCGGCACCTTCGTCGGTATATACGATGGTCACGGAGGACCCGACGCAGCGAGATACGTATGCGATCACTTGTTTCACCATTTTCAAGGTTCTTTATTCGGAATCCCCCTTAGCAGTAATAGTAACTCAATATCGGCTGAGTCACACGGAATTTTGACAACTGAGACTATTGAAAGGGCATTCCGTCAAACAGAAGAGGGGTACACTGCCCTCGTGTCAGACTTATGGAGTACTCGACCTCAGATTGCAAGTGCTGGGTCCTGTTGTCTAGTTGGACTGATATTTCAGCAGACACTATTTGTGGCCAACCTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACTGGAGGTATTGCTGCAATTCAGCTGTCTACAGAACACAACGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCTAATGATCCCCAAATTGTTGTCTTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTTTATATGAAAAAGGCGCAGTTTAATCGGGAACCACTTAATCCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCATGTCTGCAAATCCCACTATTATTTCTCATTCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCATCTGAGTAATGAAAAGGCTGTGGATATTGTCAACAGCAATCCACGTGCGGGTATTGCCAAGAGACTTATCAAGGCTGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTCCGTAATATTGACAAGAAGGTTCGACGCCATTTTCACGATGATATATCTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCGCAGCCCTAGACCCGCCCCTTTCACTTCGAAGCGCTCTCGATCACTGA 1179 0.4529 MLQALMNLIPLCLKPFGRGADKFDSIGIIGSSFGGREGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARYVCDHLFHHFQGSLFGIPLSSNSNSISAESHGILTTETIERAFRQTEEGYTALVSDLWSTRPQIASAGSCCLVGLIFQQTLFVANLGDSRVVLGKKVGNTGGIAAIQLSTEHNANLEAVRQELKELHPNDPQIVVFKHGVWRVKGIIQVSRSIGDVYMKKAQFNREPLNPKFRLPEPMNMPIMSANPTIISHSLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPRAGIAKRLIKAALHEAARKREMRYSDLRNIDKKVRRHFHDDISVIVLFLNHDLISRGAALDPPLSLRSALDH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00148 392 CDD PP2Cc 56 369 IPR001932 -
Gabi4891g00148 392 Gene3D - 47 377 IPR036457 -
Gabi4891g00148 392 Pfam Protein phosphatase 2C 79 337 IPR001932 -
Gabi4891g00148 392 PANTHER PROTEIN PHOSPHATASE 53 367 IPR015655 GO:0004722|GO:0006470
Gabi4891g00148 392 SMART PP2C_4 42 367 IPR001932 -
Gabi4891g00148 392 SUPERFAMILY PP2C-like 65 370 IPR036457 -
Gabi4891g00148 392 ProSiteProfiles PPM-type phosphatase domain profile. 55 369 IPR001932 -
Gabi4891g00148 392 FunFam Probable protein phosphatase 2C 42 46 377 - -
Gabi4891g00148 392 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00148 Gabi-Chr4891 1210951 1215493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4891g00148 1 389 PP2C-type Phosphatase Gene Family AT4G38520 55.779 7.86e-158 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00148 K01102 - gmx:100790813 653.284