Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00084 ATGGGGAGAATGGGACAAGAATCAGATTCCAAGACCCAGTTGGTATTAGAGATTTGCTCCATTTCCACACGTTCTGTGGTTTGTGTTCATAGACTTGTCTCAAACCCACACAAGGCAACTTTCATCGACTGGTATTGCATCCTTGGAGTAGAAGAAAATGCAGGGGTAAATGCCATTCGCAAGCGGTACCATAAACTGGCATTGCAACTTCATCCAGATAAGAATAAACATCCCAAGGCTGAAATTGCTTTCAAGCTTGTTTCTGAGGCATATACATGTCTATCTAATGCAGCAAAGAGAAAAGCCTTTGACTTGGAGAGATGTAAGCATTTCTGCATTGAGTGCAAAAGAATCCCATATGCATCCTGCAATGTCCCTGGCAATTCCAGTGGTTCAGGTTTCAAGGCATGGAATATTTTAAGCAGGTCAAGATCTTGTAAACTTTGGAGAAACATTAGGGAAATAAGAGAAAGATTTAAGGAGGAAGCTAAGGTGATAGAGAATTGTTTGCAAGCAAATTCAATGTCACGGAAAGAGTCTCCACTATACAACCCGGTTGGCTATCTACATAGAAGCAAATCACTGCATAGATTTGAGAGAGAAACCCCTGTTTTCAATCCATCGGATTACTTATACCAAGGCTATCCTCATCTGAGGAGCCATGTTTACAATAATTCTGCGACATTTTGGTACTTACAGACAGATAGTTTGCTGCACAAGAGAGGAGCGCAGCACGCCTCCCCTGTTTTTGAGGTCAAATCAAGAAGTATGTTTACAAGCAAATTTGCTTTTGTCCCATCACAATGTTAG 810 0.4123 MGRMGQESDSKTQLVLEICSISTRSVVCVHRLVSNPHKATFIDWYCILGVEENAGVNAIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSNAAKRKAFDLERCKHFCIECKRIPYASCNVPGNSSGSGFKAWNILSRSRSCKLWRNIREIRERFKEEAKVIENCLQANSMSRKESPLYNPVGYLHRSKSLHRFERETPVFNPSDYLYQGYPHLRSHVYNNSATFWYLQTDSLLHKRGAQHASPVFEVKSRSMFTSKFAFVPSQC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00084 269 Gene3D DnaJ domain 42 137 IPR036869 -
Gabi4891g00084 269 FunFam Chaperone protein dnaJ 49 isoform A 42 165 - -
Gabi4891g00084 269 CDD DnaJ 43 96 IPR001623 -
Gabi4891g00084 269 PRINTS DnaJ domain signature 79 99 IPR001623 -
Gabi4891g00084 269 PRINTS DnaJ domain signature 45 63 IPR001623 -
Gabi4891g00084 269 PRINTS DnaJ domain signature 63 78 IPR001623 -
Gabi4891g00084 269 Pfam DnaJ domain 43 104 IPR001623 -
Gabi4891g00084 269 SUPERFAMILY Chaperone J-domain 32 106 IPR036869 -
Gabi4891g00084 269 ProSiteProfiles dnaJ domain profile. 43 107 IPR001623 -
Gabi4891g00084 269 PANTHER BNAC03G44070D PROTEIN 23 231 - -
Gabi4891g00084 269 SMART dnaj_3 42 99 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00084 Gabi-Chr4891 725694 726847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4891g00084 43 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.424 4.09e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00084 - - gmx:100801809 457.218