Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00046 ATGGATTTCTTATTACAGGAGATAAACATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGTGATAGAGGTATTCCCTGTGAGGTCGCTAGTGGCTACAAAATCCTTCCTGATGTCCGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGCGCAGCCTTAAGTGCTAATGCTACACTAGCCAACACAAATATCTGCAATGGTAAGATAGGAGGGGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACATGCTATCATCTTCCCTCCCAAGTAGTTTGTCTTACCTAAGCTGCAGTCCTTCCACTCCAAGTGACATACTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTGAGGAAGTACAAGTTGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCGGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTTCTTAAACAAGTTAATTTGGGAATTGGAACCAGGTTCCATCAAAGATACTAACGATGTGGTTTTGGGTGGATCCCTTCAATATAAATTGGATGATAGTCTTATTTGCGCTGAGGATCAATCTCTATCAAGATTTAAGGGGAAAAATGATTCTAATCATGGCTCTTTTTCAAAGAGCAGTCCATCTGCTAAGTCAGAAGCATCATGTAAATCATTTTCACATGGGGTACTTGATAGCCTCCAACTTGCTCTTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGTAATGATTTGTATACATTTAATCTCGGTGACAGCAGAGCGGTATTGGCAACATGCAGTACAGGTGACAGAATGAATAAGAGTGAGAGACTCAATGCCATACAGCTTACAGATAGCCATACTGTTGATAATGAAACAGAAAGAGTTAGACTTCTGGCTGACCATCCTGATGATCCCAAGGTCATTATAGCAGGAAAAGTGAAAGGGAAACTCAAGGTTACTCGTGCTTTTGGAGTCGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTACAAGCCCACCATATATTGCCACTCAACCATCCTTGAGTGTCCATAAAATCTCAAATTATGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTAGTAGAATCTTATATCTTGAGCAATCCTCTGGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAGTATTCCGGCTGGAAGGAGAAGGAAGTACCATGATGACGTGACCGTAATTGTGATCATGCTTGGGATGAATCAGCGGACTTCAAAGGCATCAACTTGCATCTAA 1602 0.4101 MDFLLQEINMLSPEGELKISFGYKCNSDRGIPCEVASGYKILPDVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSKLDMLSSSLPSSLSYLSCSPSTPSDILEYDSCTLKSMSDPSRSEGFLNAEEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISFLNKLIWELEPGSIKDTNDVVLGGSLQYKLDDSLICAEDQSLSRFKGKNDSNHGSFSKSSPSAKSEASCKSFSHGVLDSLQLALSQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTFNLGDSRAVLATCSTGDRMNKSERLNAIQLTDSHTVDNETERVRLLADHPDDPKVIIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYIATQPSLSVHKISNYDQFVIVGSDGLFDFFSNDEAVKLVESYILSNPLGDPAKFLIEQLVARAADSAGFSMEELMSIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00046 533 Pfam Protein phosphatase 2C 268 484 IPR001932 -
Gabi4891g00046 533 CDD PP2Cc 158 518 IPR001932 -
Gabi4891g00046 533 ProSiteProfiles PPM-type phosphatase domain profile. 145 520 IPR001932 -
Gabi4891g00046 533 PANTHER PROTEIN PHOSPHATASE 2C 150 518 IPR015655 GO:0004722|GO:0006470
Gabi4891g00046 533 FunFam Probable protein phosphatase 2C 40 126 529 - -
Gabi4891g00046 533 SUPERFAMILY PP2C-like 159 521 IPR036457 -
Gabi4891g00046 533 Gene3D - 118 529 IPR036457 -
Gabi4891g00046 533 SMART PP2C_4 132 518 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00046 Gabi-Chr4891 330383 332845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4891g00046 13 533 PP2C-type Phosphatase Gene Family AT3G16560 61.480 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00046 - - gmx:100808304 884.404