Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00045 ATGGATTTCTTATTACAGGAGATAAACATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGTGATAGAGGTATTCCCTGTGAGGTCGCTAGTGGCTACAAAATCCTTCCTGATGTCCGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGCGCAGCCTTAAGTGCTAATGCTACACTAGCCAACACAAATATCTGCAATGGTAAGATAGGAGGGGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACATGCTATCATCTTCCCTCCCAAGTAGTTTGTCTTACCTAAGCTGCAGTCCTTCCACTCCAAGTGACATACTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTGAGGAAGTACAAGTTGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCGGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTTCTTAAACAAGTTAATTTGGGAATTGGAACCAGGTTCCATCAAAGATACTAACGATGTGGTTTTGGGTGGATCCCTTCAATATAAATTGGATGATACATCATGTAAATCATTTTCACATGGGGTACTTGATAGCCTCCAACTTGCTCTTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGTAATGATTTGTATACATTTAATCTCGGTGACAGCAGAGCGGTATTGGCAACATGCAGTACAGGTGACAGAATGAATAAGAGTGAGAGACTCAATGCCATACAGCTTACAGATAGCCATACTGTTGATAATGAAACAGAAAGAGTTAGACTTCTGGCTGACCATCCTGATGATCCCAAGGTCATTATAGCAGGAAAAGTGAAAGGGAAACTCAAGGTTACTCGTGCTTTTGGAGTCGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTACAAGCCCACCATATATTGCCACTCAACCATCCTTGAGTGTCCATAAAATCTCAAATTATGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTAGTAGAATCTTATATCTTGAGCAATCCTCTGGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAGTATTCCGGCTGGAAGGAGAAGGAAGTACCATGATGACGTGACCGTAATTGTGATCATGCTTGGGATGAATCAGCGGACTTCAAAGGCATCAACTTGCATCTAA 1500 0.412 MDFLLQEINMLSPEGELKISFGYKCNSDRGIPCEVASGYKILPDVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSKLDMLSSSLPSSLSYLSCSPSTPSDILEYDSCTLKSMSDPSRSEGFLNAEEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISFLNKLIWELEPGSIKDTNDVVLGGSLQYKLDDTSCKSFSHGVLDSLQLALSQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTFNLGDSRAVLATCSTGDRMNKSERLNAIQLTDSHTVDNETERVRLLADHPDDPKVIIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYIATQPSLSVHKISNYDQFVIVGSDGLFDFFSNDEAVKLVESYILSNPLGDPAKFLIEQLVARAADSAGFSMEELMSIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00045 499 FunFam Probable protein phosphatase 2C 40 126 495 - -
Gabi4891g00045 499 SMART PP2C_4 132 484 IPR001932 -
Gabi4891g00045 499 Gene3D - 118 495 IPR036457 -
Gabi4891g00045 499 SUPERFAMILY PP2C-like 159 487 IPR036457 -
Gabi4891g00045 499 ProSiteProfiles PPM-type phosphatase domain profile. 145 486 IPR001932 -
Gabi4891g00045 499 Pfam Protein phosphatase 2C 171 450 IPR001932 -
Gabi4891g00045 499 CDD PP2Cc 158 484 IPR001932 -
Gabi4891g00045 499 PANTHER PROTEIN PHOSPHATASE 2C 150 484 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00045 Gabi-Chr4891 330383 332845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4891g00045 13 499 PP2C-type Phosphatase Gene Family AT3G16560 65.314 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00045 - - gmx:100808304 825.083