Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00043 ATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGTGATAGAGGTATTCCCTGTGAGGTCGCTAGTGGCTACAAAATCCTTCCTGATGTCCGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGCGCAGCCTTAAGTGCTAATGCTACACTAGCCAACACAAATATCTGCAATGGTAAGATAGGAGGGGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTACCCTCTTCGCCAAGTCTTTCAAAGTTGGACATGCTATCATCTTCCCTCCCAAGTAGTTTGTCTTACCTAAGCTGCAGTCCTTCCACTCCAAGTGACATACTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTGAGGAAGTACAAGTTGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCGGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTTCTTAAACAAGTTAATTTGGGAATTGGAACCAGGTTCCATCAAAGATACTAACGATGTGGTTTTGGGTGGATCCCTTCAATATAAATTGGATGATAGTCTTATTTGCGCTGAGGATCAATCTCTATCAAGATTTAAGGGGAAAAATGATTCTAATCATGGCTCTTTTTCAAAGAGCAGTCCATCTGCTAAGTCAGAAGCATCATGTAAATCATTTTCACATGGGGTACTTGATAGCCTCCAACTTGCTCTTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGTAATGATTTGTATACATTTAATCTCGGTGACAGCAGAGCGGTATTGGCAACATGCAGTACAGGTGACAGAATGAATAAGAGTGAGAGACTCAATGCCATACAGCTTACAGATAGCCATACTGTTGATAATGAAACAGAAAGAGTTAGACTTCTGGCTGACCATCCTGATGATCCCAAGGTCATTATAGCAGGAAAAGTGAAAGGGAAACTCAAGGTTACTCGTGCTTTTGGAGTCGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTACAAGCCCACCATATATTGCCACTCAACCATCCTTGAGTGTCCATAAAATCTCAAATTATGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTAGTAGAATCTTATATCTTGAGCAATCCTCTGGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAGTATTCCGGCTGGAAGGAGAAGGAAGTACCATGATGACGTGACCGTAATTGTGATCATGCTTGGGATGAATCAGCGGACTTCAAAGGCATCAACTTGCATCTAA 1575 0.4121 MLSPEGELKISFGYKCNSDRGIPCEVASGYKILPDVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSKLDMLSSSLPSSLSYLSCSPSTPSDILEYDSCTLKSMSDPSRSEGFLNAEEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISFLNKLIWELEPGSIKDTNDVVLGGSLQYKLDDSLICAEDQSLSRFKGKNDSNHGSFSKSSPSAKSEASCKSFSHGVLDSLQLALSQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTFNLGDSRAVLATCSTGDRMNKSERLNAIQLTDSHTVDNETERVRLLADHPDDPKVIIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYIATQPSLSVHKISNYDQFVIVGSDGLFDFFSNDEAVKLVESYILSNPLGDPAKFLIEQLVARAADSAGFSMEELMSIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00043 524 SMART PP2C_4 123 509 IPR001932 -
Gabi4891g00043 524 Gene3D - 109 520 IPR036457 -
Gabi4891g00043 524 Pfam Protein phosphatase 2C 259 475 IPR001932 -
Gabi4891g00043 524 SUPERFAMILY PP2C-like 150 512 IPR036457 -
Gabi4891g00043 524 ProSiteProfiles PPM-type phosphatase domain profile. 136 511 IPR001932 -
Gabi4891g00043 524 FunFam Probable protein phosphatase 2C 40 117 520 - -
Gabi4891g00043 524 CDD PP2Cc 149 509 IPR001932 -
Gabi4891g00043 524 PANTHER PROTEIN PHOSPHATASE 2C 141 509 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00043 Gabi-Chr4891 330383 335725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4891g00043 4 524 PP2C-type Phosphatase Gene Family AT3G16560 61.480 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00043 - - gmx:100808304 880.937