Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4891g00015 ATGGCCCCTTCTAGAAAATCTAAAAGTGTTAATAAGAAGTTTTCTAATATTCGTGAGGCTGCATCTAGTAAAGATAAAAATTCAGAGAATGCTAGCAAGAATAGGCAGAAGAAGAGAAAATTGGCTGATATGTTAGGGCCACAATGGAGTAAGGAGGAGCTTCAGCATTTCTATGAAGCTTATCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGATCTGTGGAAATGGTAGAAGCCCTGTACACTATGAACAGGGCATACCTATCTCTTCCAGAGGGCACTGCTTCTGTTATTGGACTGATAGCAATGATGACAGATCATTATAGTGTACTGGGAGGAAGTGACAGTGGAAAAGAAAGCAGTGAAGATGCAGAATTATCTAAAAAGTCTAAAAAACGTTTGCGGGGAAAGCATTTAAATGACAATAAAGCATTAGATGGACACTTTTCAGATCATTCTCAGTCACATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAATAGGCATTCTGGAATTAGGCCTCATGCTGTTCGAAAAAGGACCCCCCGTGTCCCTGTTTCATATTCTATTGGTAAAGATAATGCGGAGAAGATTTTTTCATCTGCTAGGCGGAGCTCCAAACAAATAGTTGATACTAATGATGTTGCTCATAAGATTGCATTAGCATTGACAGAGGCTTCACAAAGAGGTGGCTCTTCAAAAATTTCTGGATCACCAAACAAGAAAAATATGCCATCGCCTGGTCAGAAAAGTGGGAAGAAGCATGCTATATCAGAAATATCTGGAGCCAAGTTTTGCAATTCTGACTTGGATGAGGGTAGTTCTGAGTTGAGTTTAGGAAGGACAGAAGGCGGCAATGTCAATTGTTCTGGAAAAACAAATCATTGGAGCAGTAGAAAAAGTACTGGAAAAGTAAGGAATCAGGAAAAGAGAATAAAACACTACAGGAAGAATTTAGAACCTGAGGAAAATTTAAACCAGCATTTGAATGACAAAAAGGAAGCCTCCAGTGGGACAGATGATGGTAAAAGTCTGAGTTTTATCAAATCCAACTTTGACACAGATTTTGCATACGCAAAAAATTTGAAGTCCTTTTACAAAGGTTCCAGAAAGAAAAGTAAAAAGCTATTGTTTGAGAAAGATGAAGGTTCTGCTTTTGATGCTCTGAAAACTTTAGCTGATCTGTCTTTGATGATGCCTGTAACAAACCCTGACACTGAGTCATCTGCTCAGTTCAAGGAAGGAAACCATGAAGTTGTTAATGAGTCTAAAATGGAAACGCATAATGTATCTCCCAGGATTGAAAGCACCACTTCAAGTAAATTAGCCAAGGTTTTTTCTGATAATGGAGTTGCTGTTCCTGAAGCAGAAGGAGCGGACCTGCTTAATGCAGGAATCGGGAAAAGGAAACAGAAATCTTCTACCTTAAAAGCTACTGATGAGGTGAAGAAGTCCATGGTTAAAGGTAAGCGGTCATCTGTTTGTACAGCACGTTCAAGACAACTAAAAGTGGTTAGGTCTCCAGGAAAGATGTCTTCAAGTACTTATGACAAAACGGAAAGGGATGATTCATCTTTTTCCCCCATGAAGGTTTTGTCTACTAACCAAGTCAGTCTAGTAAACAGAGGAAGGCCCAAAAGAAAGATGGAAAAACCAAAACCAATGGTACAACGAGATCCGACGGTGTCTGGAAATATTTTTAGTGGTCAACGTAATAAATCCATTGCTTCACTCCCGAATAGTTCTGTTAGTCACAAGGGAAAACTTATTAATTGCTTGTCTTCATGTCAAACACGGCGGTGGTGCACTTTTGAGTGGTTTTATAGTGCTATTGATTACCCATGGTTTTTAAAGAGAGAGTTTGCAGAGTACTTGGACCATGTCGGATTGGGTCATGCTCCCAGGTTGACTCAGATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGTAGACCACGAAGATTTTCAGAGAAATTTTTGATAGAAGAAAAACATAAACTTAATCAATACCGGGAATCTGTTAGGTCATATTACGCTGAGTTTCTTGCTGGTCGCAAGGAAGGCCTTCCTACTGATTTGGCACAACCTTTAATTGTTGGGCAGCGTGTTATTGCTATTCATCCGAAGACAAGAGAGATTCATGATGGAAGTATACTAACTGTTGACCATTGTAGGTGTCGGGTTCAGTTTGACCAGCCTGAACTTGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTATGTATCCATCTGAAAATCTGCCTACATCTCTGGTAAGACACAATATCACTCCTGCTAGAATAAGTGAGAATCTCAATGAGCTCAAGCTTAATGGGAAACTGAAACAAAGAAAGGTTGCTGAGCACACAATATTGTCCCTTAGTGAGAACTCAGATACCATTAAAGGTCTTTATATATCCCCCACTACGCATGGAAACAGTACTTTATCAAAACAGGGGTTTCCCTCAAGCTGCAAATCACAAGCGAAAGTTGTGTGCAGTGAGATTGGTAATGCCCAACTACCATCAAGTTCTCAACCTCCCCTTCTTGAACATGTCCATTCAAAAGAAGCTGATATATTAGCCATTTCAGAGTTGTCTCGTGCTCTAGACAAGAAGGAACTTGTGTTGTCTGAACTGAAGCACATGAACGATGGGGTATTGGAAAGCCACAAACATGGAGACAACTCAGTGAAGGACTCAGAACCTTTTGTGAGGAATTATGCTTTAGTACTAAAGCAATTAACTGAAGTCAATGACCAGGTTTCTTCTGCCTTGTTTTGCTTGAGACAACGCAACACATATCAAGGAAGCTCCTCAATTTTGTCATTAAAGCCCAAGGATAATTTTGATGATCCTGGTGGTCAGGCTAGCTCTTCCAATTGTTCAGCTTGCCACAATCAAGAATCTATATCTCAAAGTCATATAGCTGAAATTGTCGAAAGTTCTAGAAGAAAAGCCCGAACTATGGTTGTTCAAGCTACGCAGGCAATGTCAATTTTTAGAAAGACAGAAAGTAAGGTTGAAAGAATTGAGGATGCAATAAATTTTATCAATAACCGGCTTTCAGTGGATAACCCTACTGCTTCAGCCACAAATTTGCTGTCTGCAGATTCTATTACTCTGGCTTCTCAGGATCAATTGACTCCTGCCAGCGCATTAAATTCCTTGGCAAATTGTCATGTGCAAGATGCTGAACTTAACAGTTCATCTGACCAAAATGAAATGAAAATTCCCTCAGAACTCATATCTCATTGTCTAGCTACACTGCTTATGATTCAGAAGTGTACAGAACGACAATTTCCCCCAGCTGATGTTGCTCAGGTACTAGATTGTGCTGTAACCAGTTTGCAACCTTTTTGTTCAAGGAATCTTCCAATATATGGTGAGATACAGAAATGCATGGGTATCATAAGAAATCAAATATTGGCACTCATACCTACCTAG 3471 0.3984 MAPSRKSKSVNKKFSNIREAASSKDKNSENASKNRQKKRKLADMLGPQWSKEELQHFYEAYRKYGKDWKKVALAVRNRSVEMVEALYTMNRAYLSLPEGTASVIGLIAMMTDHYSVLGGSDSGKESSEDAELSKKSKKRLRGKHLNDNKALDGHFSDHSQSHSVASGDGCLSLLKNRHSGIRPHAVRKRTPRVPVSYSIGKDNAEKIFSSARRSSKQIVDTNDVAHKIALALTEASQRGGSSKISGSPNKKNMPSPGQKSGKKHAISEISGAKFCNSDLDEGSSELSLGRTEGGNVNCSGKTNHWSSRKSTGKVRNQEKRIKHYRKNLEPEENLNQHLNDKKEASSGTDDGKSLSFIKSNFDTDFAYAKNLKSFYKGSRKKSKKLLFEKDEGSAFDALKTLADLSLMMPVTNPDTESSAQFKEGNHEVVNESKMETHNVSPRIESTTSSKLAKVFSDNGVAVPEAEGADLLNAGIGKRKQKSSTLKATDEVKKSMVKGKRSSVCTARSRQLKVVRSPGKMSSSTYDKTERDDSSFSPMKVLSTNQVSLVNRGRPKRKMEKPKPMVQRDPTVSGNIFSGQRNKSIASLPNSSVSHKGKLINCLSSCQTRRWCTFEWFYSAIDYPWFLKREFAEYLDHVGLGHAPRLTQIEWGVIRSSLGRPRRFSEKFLIEEKHKLNQYRESVRSYYAEFLAGRKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSILTVDHCRCRVQFDQPELGVEFVMDIDCMPMYPSENLPTSLVRHNITPARISENLNELKLNGKLKQRKVAEHTILSLSENSDTIKGLYISPTTHGNSTLSKQGFPSSCKSQAKVVCSEIGNAQLPSSSQPPLLEHVHSKEADILAISELSRALDKKELVLSELKHMNDGVLESHKHGDNSVKDSEPFVRNYALVLKQLTEVNDQVSSALFCLRQRNTYQGSSSILSLKPKDNFDDPGGQASSSNCSACHNQESISQSHIAEIVESSRRKARTMVVQATQAMSIFRKTESKVERIEDAINFINNRLSVDNPTASATNLLSADSITLASQDQLTPASALNSLANCHVQDAELNSSSDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDCAVTSLQPFCSRNLPIYGEIQKCMGIIRNQILALIPT 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4891g00015 1156 SMART DIRP_2 616 717 IPR033471 -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 119 163 - -
Gabi4891g00015 1156 Gene3D - 2 101 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 1 17 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 283 310 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 283 352 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 1 44 - -
Gabi4891g00015 1156 CDD SANT 49 83 IPR001005 -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 18 44 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 551 577 - -
Gabi4891g00015 1156 ProSiteProfiles SANT domain profile. 44 81 IPR017884 -
Gabi4891g00015 1156 PANTHER LIN-9 1 1156 IPR010561 GO:0006351|GO:0017053
Gabi4891g00015 1156 Coils Coil 871 891 - -
Gabi4891g00015 1156 SMART sant 45 93 IPR001005 -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 513 536 - -
Gabi4891g00015 1156 Coils Coil 1009 1029 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 235 266 - -
Gabi4891g00015 1156 SUPERFAMILY Homeodomain-like 44 92 IPR009057 -
Gabi4891g00015 1156 Pfam DIRP 615 716 IPR033471 -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 235 256 - -
Gabi4891g00015 1156 MobiDBLite consensus disorder prediction 322 348 - -
Gabi4891g00015 1156 Pfam Myb-like DNA-binding domain 48 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4891g00015 Gabi-Chr4891 123791 149545 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4891g00015 DIRP 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4891g00015 - - gmx:100781646 1826.6