Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4890g00005 ATGTCCAATCAAACTTCCTCAACCATTGATCCCTACAAGCATTTGCAAATCATCTACAACCCCGATGGCACACTCACTCGCATGCTTCCTGATCCACGCACCTTACCCTCATCAGACACCACGCTTCCTATCTCTGTTCTCACCAAAGATGTCACCATCAACCAAATAAACAACACTTGGGTTCGATTATTCCTACCCCGAAAAGCAATACCGGTTCATGGTTATTCCACTTCCAACCAAAACCACAAGCTACCTCTCATCGTTTTCTTCCATGGTGGCGGATTCATCTTAGGTAGTGCTGCTTCCACCAGGTACCATGATTTTTGCTTGAACATGGCAGATAGCATTAAAGCCGTCGTTGCATCGGTGGAATACCGCCTTGCGCCGGAGCACCGGGCGCCGGCGGCGTATGATGATGCCATGGAAGCGGTGCTTTTCATTAGAAGCAGCCAAGATGAGTGGTTGACTCAATATGTTGACTATTCTAATTGTTATTTGATGGGGAATAGTGCTGGGGCTGTTATTGCCTACCATGCAGGTCTACGTGCAGCACAAGAGGTTGATCATCTTGAACCACTGAAGATCAAAGGGTTGATACTGCGTCAACCAGGCTTTGCTGGGACCAAGAGGACTGATTCAGAGTTGAGGCTTGAGAATGATCCTGTTCTTCCGTTGTGTGTTACCGATATGTTGGCGGAGCTAGTATTGCCAATTGGGGTTGACCGTGATCATGAGTATTGCAATCCAATGGTTGGGGATGGTCCTAAAAAACTAGATAAGATCAAGGATCTTGGGTGGAGGGTATTGGTGAGTGGAAATGGTGGGGACCCACTTGTGGACCGTGGGAAGGAACTTGTGCAGTTGATGGAGGAAAAGGGTGTTCAAGTAGTTAGTAACTTTGAGGAAGAGGGTCGCCATGCGGAAGAGATATTTGACCCAATTAAAGCAAAGGAACTATATGGATTAGTGAAAGGTTTCATTTCCTCAATTTCTGCTTAG 999 0.4665 MSNQTSSTIDPYKHLQIIYNPDGTLTRMLPDPRTLPSSDTTLPISVLTKDVTINQINNTWVRLFLPRKAIPVHGYSTSNQNHKLPLIVFFHGGGFILGSAASTRYHDFCLNMADSIKAVVASVEYRLAPEHRAPAAYDDAMEAVLFIRSSQDEWLTQYVDYSNCYLMGNSAGAVIAYHAGLRAAQEVDHLEPLKIKGLILRQPGFAGTKRTDSELRLENDPVLPLCVTDMLAELVLPIGVDRDHEYCNPMVGDGPKKLDKIKDLGWRVLVSGNGGDPLVDRGKELVQLMEEKGVQVVSNFEEEGRHAEEIFDPIKAKELYGLVKGFISSISA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4890g00005 332 PANTHER ARYLACETAMIDE DEACETYLASE 27 306 - -
Gabi4890g00005 332 Pfam alpha/beta hydrolase fold 87 307 IPR013094 GO:0016787
Gabi4890g00005 332 SUPERFAMILY alpha/beta-Hydrolases 23 327 IPR029058 -
Gabi4890g00005 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 IPR002168 GO:0016787
Gabi4890g00005 332 Gene3D alpha/beta hydrolase 12 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4890g00005 Gabi-Chr4890 115709 116874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4890g00005 18 312 Carbohydrate Esterase AT5G16080 34.868 2.21e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4890g00005 - - aprc:113866682 442.58